RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
SH3TC2-201ENST00000323829 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
SH3TC2-201ENST00000323829 ERICH6Q7L0X2 663 aa14.34□□□□□ -0.11
SH3TC2-201ENST00000323829 MYT1Q01538 1121 aa14.28□□□□□ -0.12
SH3TC2-201ENST00000323829 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
SH3TC2-201ENST00000323829 CCER1Q8TC90 406 aaPredicted RBP13.91□□□□□ -0.18
SH3TC2-201ENST00000323829 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.2
SH3TC2-201ENST00000323829 FAM9AQ8IZU1 332 aaPredicted RBP13.7□□□□□ -0.22
SH3TC2-201ENST00000323829 TTBK1Q5TCY1 1321 aaPredicted RBP13.64□□□□□ -0.23
SH3TC2-201ENST00000323829 NISCHQ9Y2I1 1504 aa13.63□□□□□ -0.23
SH3TC2-201ENST00000323829 SHROOM4Q9ULL8 1493 aa13.6□□□□□ -0.23
SH3TC2-201ENST00000323829 APLP2Q06481 763 aa13.58□□□□□ -0.24
SH3TC2-201ENST00000323829 DAXXQ9UER7 740 aaPredicted RBP13.52□□□□□ -0.24
SH3TC2-201ENST00000323829 NEFLP07196 543 aa13.38□□□□□ -0.27
SH3TC2-201ENST00000323829 ATP1B4Q9UN42 357 aaPredicted RBP13.37□□□□□ -0.27
SH3TC2-201ENST00000323829 RANGAP1P46060 587 aaPredicted RBP13.35□□□□□ -0.27
SH3TC2-201ENST00000323829 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
SH3TC2-201ENST00000323829 CENPBP07199 599 aaPredicted RBP13.27□□□□□ -0.29
SH3TC2-201ENST00000323829 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
SH3TC2-201ENST00000323829 CHIC1Q5VXU3 224 aa13.24□□□□□ -0.29
SH3TC2-201ENST00000323829 POLR3GLQ9BT43 218 aa13.17□□□□□ -0.3
SH3TC2-201ENST00000323829 MYT1LQ9UL68 1186 aa13.17□□□□□ -0.3
SH3TC2-201ENST00000323829 CNGB1Q14028 1251 aaPredicted RBP13.16□□□□□ -0.3
SH3TC2-201ENST00000323829 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
SH3TC2-201ENST00000323829 ZNF316A6NFI3 1004 aaPredicted RBP13.12□□□□□ -0.31
SH3TC2-201ENST00000323829 ZEB1P37275 1124 aaPredicted RBP13.1□□□□□ -0.31
SH3TC2-201ENST00000323829 HRCP23327 699 aa13.08□□□□□ -0.32
SH3TC2-201ENST00000323829 CLSPNQ9HAW4 1339 aa13.05□□□□□ -0.32
SH3TC2-201ENST00000323829 BCL11AQ9H165 835 aa13.02□□□□□ -0.33
SH3TC2-201ENST00000323829 RTL5Q5HYW3 569 aaPredicted RBP12.95□□□□□ -0.34
SH3TC2-201ENST00000323829 SLC24A1O60721 1099 aa12.93□□□□□ -0.34
SH3TC2-201ENST00000323829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.85□□□□□ -0.35
SH3TC2-201ENST00000323829 HNRNPUL2Q1KMD3 747 aaKnown RBP12.85□□□□□ -0.35
SH3TC2-201ENST00000323829 UBTFP17480 764 aaKnown RBP12.81□□□□□ -0.36
SH3TC2-201ENST00000323829 TRIM41Q8WV44 630 aa12.76□□□□□ -0.37
SH3TC2-201ENST00000323829 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
SH3TC2-201ENST00000323829 TRIM26Q12899 539 aaPredicted RBP12.72□□□□□ -0.37
SH3TC2-201ENST00000323829 PPARGC1BQ86YN6 1023 aaKnown RBP12.67□□□□□ -0.38
SH3TC2-201ENST00000323829 EIF5BO60841 1220 aaKnown RBP12.65□□□□□ -0.38
SH3TC2-201ENST00000323829 ITGAEP38570 1179 aa12.59□□□□□ -0.39
SH3TC2-201ENST00000323829 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
SH3TC2-201ENST00000323829 CDK11BP21127 795 aaKnown RBP12.55□□□□□ -0.4
SH3TC2-201ENST00000323829 CDK11AQ9UQ88 783 aaPredicted RBP12.55□□□□□ -0.4
SH3TC2-201ENST00000323829 TULP1O00294 542 aaPredicted RBP12.53□□□□□ -0.4
SH3TC2-201ENST00000323829 PABPN1Q86U42 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
SH3TC2-201ENST00000323829 FBLN2P98095 1184 aa12.47□□□□□ -0.41
SH3TC2-201ENST00000323829 ABCC9O60706 1549 aa12.46□□□□□ -0.41
SH3TC2-201ENST00000323829 BCANQ96GW7 911 aa12.45□□□□□ -0.42
SH3TC2-201ENST00000323829 CANXP27824 592 aaKnown RBP12.44□□□□□ -0.42
SH3TC2-201ENST00000323829 ANP32BQ92688 251 aaKnown RBP12.42□□□□□ -0.42
SH3TC2-201ENST00000323829 ARXQ96QS3 562 aa12.37□□□□□ -0.43
SH3TC2-201ENST00000323829 LOC105371045A0A1W2PR82 267 aa12.36□□□□□ -0.43
SH3TC2-201ENST00000323829 GTF3C3Q9Y5Q9 886 aa12.36□□□□□ -0.43
SH3TC2-201ENST00000323829 DIEXFQ68CQ4 756 aaKnown RBP12.35□□□□□ -0.43
SH3TC2-201ENST00000323829 GLIPR1L2Q4G1C9 344 aa12.34□□□□□ -0.43
SH3TC2-201ENST00000323829 A0A0G2JS52 829 aa12.33□□□□□ -0.44
SH3TC2-201ENST00000323829 NPM2Q86SE8 214 aaKnown RBP12.33□□□□□ -0.44
SH3TC2-201ENST00000323829 HSP90AA1P07900 732 aaKnown RBP12.32□□□□□ -0.44
SH3TC2-201ENST00000323829 PLPPR3Q6T4P5 718 aa12.31□□□□□ -0.44
SH3TC2-201ENST00000323829 ACIN1Q9UKV3 1341 aaKnown RBP12.3□□□□□ -0.44
SH3TC2-201ENST00000323829 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
SH3TC2-201ENST00000323829 NEFMP07197 916 aa12.25□□□□□ -0.45
SH3TC2-201ENST00000323829 ESF1Q9H501 851 aaKnown RBP12.22□□□□□ -0.45
SH3TC2-201ENST00000323829 ZNF326Q5BKZ1 582 aaKnown RBP12.18□□□□□ -0.46
SH3TC2-201ENST00000323829 SCAF1Q9H7N4 1312 aaKnown RBP12.17□□□□□ -0.46
SH3TC2-201ENST00000323829 PRM3Q9NNZ6 103 aa12.17□□□□□ -0.46
SH3TC2-201ENST00000323829 TRIM52Q96A61 297 aa12.13□□□□□ -0.47
SH3TC2-201ENST00000323829 FAM50AQ14320 339 aaKnown RBP12.12□□□□□ -0.47
SH3TC2-201ENST00000323829 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
SH3TC2-201ENST00000323829 ANP32AP39687 249 aaKnown RBP12.11□□□□□ -0.47
SH3TC2-201ENST00000323829 TPRNQ4KMQ1 711 aa12.1□□□□□ -0.47
SH3TC2-201ENST00000323829 PLEKHG5O94827 1062 aa12.09□□□□□ -0.47
SH3TC2-201ENST00000323829 CLSTN1O94985 981 aa12.07□□□□□ -0.48
SH3TC2-201ENST00000323829 TAOK2Q9UL54 1235 aa12.07□□□□□ -0.48
SH3TC2-201ENST00000323829 ARID3CA6NKF2 412 aa12.06□□□□□ -0.48
SH3TC2-201ENST00000323829 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
SH3TC2-201ENST00000323829 NEUROD1Q13562 356 aa12.04□□□□□ -0.48
SH3TC2-201ENST00000323829 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
SH3TC2-201ENST00000323829 TNNT2P45379 298 aaPredicted RBP12.02□□□□□ -0.49
SH3TC2-201ENST00000323829 NBR1Q14596 966 aa12□□□□□ -0.49
SH3TC2-201ENST00000323829 TRIM44Q96DX7 344 aaPredicted RBP11.98□□□□□ -0.49
SH3TC2-201ENST00000323829 UPF2Q9HAU5 1272 aaKnown RBP11.97□□□□□ -0.49
SH3TC2-201ENST00000323829 FBXO3Q9UK99 471 aa11.97□□□□□ -0.49
SH3TC2-201ENST00000323829 ZBTB7CA1YPR0 619 aa11.97□□□□□ -0.49
SH3TC2-201ENST00000323829 ZNF777Q9ULD5 760 aaPredicted RBP11.96□□□□□ -0.5
SH3TC2-201ENST00000323829 KRI1Q8N9T8 703 aaKnown RBP11.94□□□□□ -0.5
SH3TC2-201ENST00000323829 P3H3Q8IVL6 736 aa11.92□□□□□ -0.5
SH3TC2-201ENST00000323829 DNTTIP2Q5QJE6 756 aaKnown RBP11.92□□□□□ -0.5
SH3TC2-201ENST00000323829 CHGAP10645 457 aaKnown RBP11.91□□□□□ -0.5
SH3TC2-201ENST00000323829 ANP32CO43423 234 aa11.9□□□□□ -0.51
SH3TC2-201ENST00000323829 ZRSR1Q15695 479 aaKnown RBP11.89□□□□□ -0.51
SH3TC2-201ENST00000323829 PDE4CQ08493 712 aa11.86□□□□□ -0.51
SH3TC2-201ENST00000323829 PTMAP06454 111 aaKnown RBP11.86□□□□□ -0.51
SH3TC2-201ENST00000323829 NCLP19338 710 aaKnown RBP11.86□□□□□ -0.51
SH3TC2-201ENST00000323829 SALL2Q9Y467 1007 aaPredicted RBP11.85□□□□□ -0.51
SH3TC2-201ENST00000323829 ANO8Q9HCE9 1232 aaPredicted RBP11.85□□□□□ -0.51
SH3TC2-201ENST00000323829 NPHP1O15259 732 aa11.84□□□□□ -0.51
SH3TC2-201ENST00000323829 PLCB2Q00722 1185 aa11.8□□□□□ -0.52
SH3TC2-201ENST00000323829 TRHP20396 242 aaPredicted RBP11.79□□□□□ -0.52
SH3TC2-201ENST00000323829 SENP3Q9H4L4 574 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms