RNA–Protein interactions for RNA: ENST00000320031.12

ITGA3-202, Transcript of integrin subunit alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGA3, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-202ENST00000320031 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
ITGA3-202ENST00000320031 MT1MQ8N339 61 aa5.32□□□□□ -1.56
ITGA3-202ENST00000320031 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
ITGA3-202ENST00000320031 KRTAP19-7Q3SYF9 63 aa5.3□□□□□ -1.56
ITGA3-202ENST00000320031 MUC2Q02817 5179 aa5.3□□□□□ -1.56
ITGA3-202ENST00000320031 FSIP2Q5CZC0 6907 aa5.23□□□□□ -1.57
ITGA3-202ENST00000320031 LCE3DQ9BYE3 92 aa5.18□□□□□ -1.58
ITGA3-202ENST00000320031 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
ITGA3-202ENST00000320031 LCE3EQ5T5B0 92 aa5.1□□□□□ -1.59
ITGA3-202ENST00000320031 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
ITGA3-202ENST00000320031 KRTAP2-3P0C7H8 128 aa5.05□□□□□ -1.6
ITGA3-202ENST00000320031 KRTAP2-4Q9BYR9 128 aa5.05□□□□□ -1.6
ITGA3-202ENST00000320031 KRTAP2-1Q9BYU5 128 aa5.05□□□□□ -1.6
ITGA3-202ENST00000320031 MT3P25713 68 aa4.96□□□□□ -1.62
ITGA3-202ENST00000320031 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
ITGA3-202ENST00000320031 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
ITGA3-202ENST00000320031 MT1AP04731 61 aa4.92□□□□□ -1.62
ITGA3-202ENST00000320031 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
ITGA3-202ENST00000320031 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
ITGA3-202ENST00000320031 USH2AO75445 5202 aa4.85□□□□□ -1.63
ITGA3-202ENST00000320031 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
ITGA3-202ENST00000320031 KRTAP6-3Q3LI67 103 aa4.82□□□□□ -1.64
ITGA3-202ENST00000320031 MT4P47944 62 aa4.81□□□□□ -1.64
ITGA3-202ENST00000320031 PRM1P04553 51 aa4.79□□□□□ -1.64
ITGA3-202ENST00000320031 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
ITGA3-202ENST00000320031 KRTAP9-7A8MTY7 169 aa4.67□□□□□ -1.66
ITGA3-202ENST00000320031 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
ITGA3-202ENST00000320031 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
ITGA3-202ENST00000320031 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
ITGA3-202ENST00000320031 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
ITGA3-202ENST00000320031 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
ITGA3-202ENST00000320031 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
ITGA3-202ENST00000320031 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
ITGA3-202ENST00000320031 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
ITGA3-202ENST00000320031 KMT2DO14686 5537 aa4.47□□□□□ -1.69
ITGA3-202ENST00000320031 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
ITGA3-202ENST00000320031 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
ITGA3-202ENST00000320031 FCGBPQ9Y6R7 5405 aaPredicted RBP4.44□□□□□ -1.7
ITGA3-202ENST00000320031 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
ITGA3-202ENST00000320031 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
ITGA3-202ENST00000320031 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
ITGA3-202ENST00000320031 MACF1Q9UPN3 7388 aaKnown RBP4.37□□□□□ -1.71
ITGA3-202ENST00000320031 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
ITGA3-202ENST00000320031 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
ITGA3-202ENST00000320031 NEBP20929 6669 aa4.06□□□□□ -1.76
ITGA3-202ENST00000320031 MDN1Q9NU22 5596 aa3.96□□□□□ -1.78
ITGA3-202ENST00000320031 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
ITGA3-202ENST00000320031 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
ITGA3-202ENST00000320031 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
ITGA3-202ENST00000320031 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
ITGA3-202ENST00000320031 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
ITGA3-202ENST00000320031 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
ITGA3-202ENST00000320031 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
ITGA3-202ENST00000320031 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
ITGA3-202ENST00000320031 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
ITGA3-202ENST00000320031 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
ITGA3-202ENST00000320031 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
ITGA3-202ENST00000320031 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
ITGA3-202ENST00000320031 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
ITGA3-202ENST00000320031 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
ITGA3-202ENST00000320031 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
ITGA3-202ENST00000320031 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
ITGA3-202ENST00000320031 KRTAP4-2Q9BYR5 136 aa3.15□□□□□ -1.91
ITGA3-202ENST00000320031 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
ITGA3-202ENST00000320031 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
ITGA3-202ENST00000320031 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
ITGA3-202ENST00000320031 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
ITGA3-202ENST00000320031 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
ITGA3-202ENST00000320031 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
ITGA3-202ENST00000320031 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
ITGA3-202ENST00000320031 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
ITGA3-202ENST00000320031 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
ITGA3-202ENST00000320031 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
ITGA3-202ENST00000320031 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
ITGA3-202ENST00000320031 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
ITGA3-202ENST00000320031 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
ITGA3-202ENST00000320031 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 82.3 ms