RNA–Protein interactions for RNA: ENST00000317357.9

SOBP-201, Transcript of sine oculis binding protein homolog, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SOBP, Length 5,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOBP-201ENST00000317357 KRTAP19-6Q3LI70 58 aa6.24□□□□□ -1.41
SOBP-201ENST00000317357 PRM1P04553 51 aa6.2□□□□□ -1.42
SOBP-201ENST00000317357 LCE2AQ5TA79 106 aaPredicted RBP6.19□□□□□ -1.42
SOBP-201ENST00000317357 KRTAP9-6A0A140TA67 174 aa6.17□□□□□ -1.42
SOBP-201ENST00000317357 MT1MQ8N339 61 aa6.12□□□□□ -1.43
SOBP-201ENST00000317357 UBR4Q5T4S7 5183 aa6.11□□□□□ -1.43
SOBP-201ENST00000317357 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
SOBP-201ENST00000317357 FAT4Q6V0I7 4981 aa6.05□□□□□ -1.44
SOBP-201ENST00000317357 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
SOBP-201ENST00000317357 MT4P47944 62 aa6□□□□□ -1.45
SOBP-201ENST00000317357 HMCN2Q8NDA2 5059 aa5.98□□□□□ -1.45
SOBP-201ENST00000317357 LCE1BQ5T7P3 118 aa5.98□□□□□ -1.45
SOBP-201ENST00000317357 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.45
SOBP-201ENST00000317357 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
SOBP-201ENST00000317357 MUC2Q02817 5179 aa5.88□□□□□ -1.47
SOBP-201ENST00000317357 FSIP2Q5CZC0 6907 aa5.84□□□□□ -1.47
SOBP-201ENST00000317357 MT1AP04731 61 aa5.81□□□□□ -1.48
SOBP-201ENST00000317357 KRTAP9-7A8MTY7 169 aa5.78□□□□□ -1.48
SOBP-201ENST00000317357 OBSCNQ5VST9 7968 aa5.75□□□□□ -1.49
SOBP-201ENST00000317357 KRTAP20-1Q3LI63 56 aa5.74□□□□□ -1.49
SOBP-201ENST00000317357 KRTAP4-9Q9BYQ8 210 aa5.74□□□□□ -1.49
SOBP-201ENST00000317357 KRTAP19-7Q3SYF9 63 aa5.72□□□□□ -1.49
SOBP-201ENST00000317357 KRTAP6-3Q3LI67 103 aa5.68□□□□□ -1.5
SOBP-201ENST00000317357 KRTAP2-3P0C7H8 128 aa5.67□□□□□ -1.5
SOBP-201ENST00000317357 KRTAP2-4Q9BYR9 128 aa5.67□□□□□ -1.5
SOBP-201ENST00000317357 KRTAP2-1Q9BYU5 128 aa5.67□□□□□ -1.5
SOBP-201ENST00000317357 LCE1AQ5T7P2 110 aa5.59□□□□□ -1.51
SOBP-201ENST00000317357 SYNE2Q8WXH0 6885 aaKnown RBP5.58□□□□□ -1.52
SOBP-201ENST00000317357 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
SOBP-201ENST00000317357 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
SOBP-201ENST00000317357 KRTAP6-2Q3LI66 62 aa5.39□□□□□ -1.55
SOBP-201ENST00000317357 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
SOBP-201ENST00000317357 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
SOBP-201ENST00000317357 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.55
SOBP-201ENST00000317357 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
SOBP-201ENST00000317357 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
SOBP-201ENST00000317357 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.59
SOBP-201ENST00000317357 LCE1CQ5T751 118 aa5.09□□□□□ -1.59
SOBP-201ENST00000317357 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
SOBP-201ENST00000317357 LCE1FQ5T754 118 aa5.09□□□□□ -1.59
SOBP-201ENST00000317357 USH2AO75445 5202 aa5.08□□□□□ -1.6
SOBP-201ENST00000317357 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
SOBP-201ENST00000317357 KMT2DO14686 5537 aa5□□□□□ -1.61
SOBP-201ENST00000317357 MACF1Q9UPN3 7388 aaKnown RBP4.99□□□□□ -1.61
SOBP-201ENST00000317357 MUC19Q7Z5P9 8384 aa4.88□□□□□ -1.63
SOBP-201ENST00000317357 KRTAP5-9P26371 169 aa4.84□□□□□ -1.64
SOBP-201ENST00000317357 NEBP20929 6669 aa4.79□□□□□ -1.64
SOBP-201ENST00000317357 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
SOBP-201ENST00000317357 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
SOBP-201ENST00000317357 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
SOBP-201ENST00000317357 GPR98Q8WXG9 6306 aa4.53□□□□□ -1.68
SOBP-201ENST00000317357 MUC12Q9UKN1 5478 aa4.46□□□□□ -1.7
SOBP-201ENST00000317357 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
SOBP-201ENST00000317357 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
SOBP-201ENST00000317357 KRTAP20-2Q3LI61 65 aa4.41□□□□□ -1.7
SOBP-201ENST00000317357 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
SOBP-201ENST00000317357 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.74
SOBP-201ENST00000317357 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
SOBP-201ENST00000317357 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
SOBP-201ENST00000317357 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
SOBP-201ENST00000317357 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
SOBP-201ENST00000317357 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
SOBP-201ENST00000317357 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
SOBP-201ENST00000317357 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
SOBP-201ENST00000317357 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
SOBP-201ENST00000317357 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
SOBP-201ENST00000317357 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
SOBP-201ENST00000317357 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
SOBP-201ENST00000317357 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
SOBP-201ENST00000317357 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
SOBP-201ENST00000317357 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
SOBP-201ENST00000317357 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
SOBP-201ENST00000317357 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
SOBP-201ENST00000317357 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
SOBP-201ENST00000317357 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
SOBP-201ENST00000317357 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
SOBP-201ENST00000317357 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms