RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 MT1AP04731 61 aa3.46□□□□□ -1.86
LAMA3-202ENST00000313654 MYCBP2O75592 4640 aa3.45□□□□□ -1.86
LAMA3-202ENST00000313654 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
LAMA3-202ENST00000313654 MUC17Q685J3 4493 aa3.4□□□□□ -1.87
LAMA3-202ENST00000313654 KRTAP19-6Q3LI70 58 aa3.37□□□□□ -1.87
LAMA3-202ENST00000313654 RYR1P21817 5038 aa3.34□□□□□ -1.87
LAMA3-202ENST00000313654 KRTAP9-2Q9BYQ4 174 aa3.31□□□□□ -1.88
LAMA3-202ENST00000313654 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
LAMA3-202ENST00000313654 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
LAMA3-202ENST00000313654 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
LAMA3-202ENST00000313654 HYDINQ4G0P3 5121 aa3.16□□□□□ -1.9
LAMA3-202ENST00000313654 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
LAMA3-202ENST00000313654 KRTAP19-7Q3SYF9 63 aa3.15□□□□□ -1.9
LAMA3-202ENST00000313654 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
LAMA3-202ENST00000313654 LRP2P98164 4655 aa3.13□□□□□ -1.91
LAMA3-202ENST00000313654 LCE2AQ5TA79 106 aaPredicted RBP3.12□□□□□ -1.91
LAMA3-202ENST00000313654 RYR3Q15413 4870 aa3.1□□□□□ -1.91
LAMA3-202ENST00000313654 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
LAMA3-202ENST00000313654 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
LAMA3-202ENST00000313654 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
LAMA3-202ENST00000313654 KRTAP19-2Q3LHN2 52 aa2.98□□□□□ -1.93
LAMA3-202ENST00000313654 PCLOQ9Y6V0 5065 aa2.97□□□□□ -1.93
LAMA3-202ENST00000313654 KRTAP9-6A0A140TA67 174 aa2.97□□□□□ -1.93
LAMA3-202ENST00000313654 KMT2CQ8NEZ4 4911 aaKnown RBP2.96□□□□□ -1.94
LAMA3-202ENST00000313654 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
LAMA3-202ENST00000313654 BIRC6Q9NR09 4857 aa2.94□□□□□ -1.94
LAMA3-202ENST00000313654 HERC2O95714 4834 aa2.88□□□□□ -1.95
LAMA3-202ENST00000313654 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
LAMA3-202ENST00000313654 HERC1Q15751 4861 aa2.83□□□□□ -1.96
LAMA3-202ENST00000313654 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
LAMA3-202ENST00000313654 KRTAP6-3Q3LI67 103 aa2.79□□□□□ -1.96
LAMA3-202ENST00000313654 KIAA1109Q2LD37 5005 aa2.75□□□□□ -1.97
LAMA3-202ENST00000313654 RYR2Q92736 4967 aa2.69□□□□□ -1.98
LAMA3-202ENST00000313654 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.63□□□□□ -1.99
LAMA3-202ENST00000313654 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
LAMA3-202ENST00000313654 HMCN2Q8NDA2 5059 aa2.61□□□□□ -1.99
LAMA3-202ENST00000313654 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
LAMA3-202ENST00000313654 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
LAMA3-202ENST00000313654 EPPK1P58107 5090 aaKnown RBP2.57□□□□□ -2
LAMA3-202ENST00000313654 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
LAMA3-202ENST00000313654 MUC2Q02817 5179 aa2.47□□□□□ -2.01
LAMA3-202ENST00000313654 KMT2DO14686 5537 aa2.42□□□□□ -2.02
LAMA3-202ENST00000313654 FAT4Q6V0I7 4981 aa2.41□□□□□ -2.02
LAMA3-202ENST00000313654 ABCA13Q86UQ4 5058 aa2.39□□□□□ -2.03
LAMA3-202ENST00000313654 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
LAMA3-202ENST00000313654 RNF213Q63HN8 5207 aa2.36□□□□□ -2.03
LAMA3-202ENST00000313654 UBR4Q5T4S7 5183 aa2.34□□□□□ -2.03
LAMA3-202ENST00000313654 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
LAMA3-202ENST00000313654 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
LAMA3-202ENST00000313654 FCGBPQ9Y6R7 5405 aaPredicted RBP2.15□□□□□ -2.07
LAMA3-202ENST00000313654 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
LAMA3-202ENST00000313654 MACF1Q9UPN3 7388 aaKnown RBP2.13□□□□□ -2.07
LAMA3-202ENST00000313654 KRTAP5-9P26371 169 aa2.01□□□□□ -2.09
LAMA3-202ENST00000313654 USH2AO75445 5202 aa2□□□□□ -2.09
LAMA3-202ENST00000313654 NEBP20929 6669 aa2□□□□□ -2.09
LAMA3-202ENST00000313654 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
LAMA3-202ENST00000313654 MDN1Q9NU22 5596 aa1.98□□□□□ -2.09
LAMA3-202ENST00000313654 SSPOA2VEC9 5147 aa1.94□□□□□ -2.1
LAMA3-202ENST00000313654 GPR98Q8WXG9 6306 aa1.9□□□□□ -2.1
LAMA3-202ENST00000313654 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
LAMA3-202ENST00000313654 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
LAMA3-202ENST00000313654 KRTAP5-3Q6L8H2 238 aa1.82□□□□□ -2.12
LAMA3-202ENST00000313654 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
LAMA3-202ENST00000313654 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
LAMA3-202ENST00000313654 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
LAMA3-202ENST00000313654 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
LAMA3-202ENST00000313654 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
LAMA3-202ENST00000313654 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
LAMA3-202ENST00000313654 KRTAP5-8O75690 187 aa1.62□□□□□ -2.15
LAMA3-202ENST00000313654 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.15
LAMA3-202ENST00000313654 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
LAMA3-202ENST00000313654 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
LAMA3-202ENST00000313654 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
LAMA3-202ENST00000313654 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.2
LAMA3-202ENST00000313654 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
LAMA3-202ENST00000313654 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
LAMA3-202ENST00000313654 KRTAP5-7Q6L8G8 165 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 139.3 ms