RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
CLCN6-201ENST00000312413 KRTAP9-6A0A140TA67 174 aa4.1□□□□□ -1.75
CLCN6-201ENST00000312413 LCE2AQ5TA79 106 aaPredicted RBP4.1□□□□□ -1.75
CLCN6-201ENST00000312413 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
CLCN6-201ENST00000312413 EPPK1P58107 5090 aaKnown RBP4.08□□□□□ -1.76
CLCN6-201ENST00000312413 MT4P47944 62 aa4.04□□□□□ -1.76
CLCN6-201ENST00000312413 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
CLCN6-201ENST00000312413 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
CLCN6-201ENST00000312413 ABCA13Q86UQ4 5058 aa4.02□□□□□ -1.77
CLCN6-201ENST00000312413 FLGP20930 4061 aaPredicted RBP3.98□□□□□ -1.77
CLCN6-201ENST00000312413 KRTAP2-3P0C7H8 128 aa3.97□□□□□ -1.77
CLCN6-201ENST00000312413 KRTAP2-4Q9BYR9 128 aa3.97□□□□□ -1.77
CLCN6-201ENST00000312413 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
CLCN6-201ENST00000312413 MT1AP04731 61 aa3.94□□□□□ -1.78
CLCN6-201ENST00000312413 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
CLCN6-201ENST00000312413 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.78
CLCN6-201ENST00000312413 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.79
CLCN6-201ENST00000312413 FAT4Q6V0I7 4981 aa3.84□□□□□ -1.8
CLCN6-201ENST00000312413 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
CLCN6-201ENST00000312413 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
CLCN6-201ENST00000312413 KRTAP20-1Q3LI63 56 aa3.81□□□□□ -1.8
CLCN6-201ENST00000312413 RNF213Q63HN8 5207 aa3.8□□□□□ -1.8
CLCN6-201ENST00000312413 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
CLCN6-201ENST00000312413 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
CLCN6-201ENST00000312413 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
CLCN6-201ENST00000312413 FSIP2Q5CZC0 6907 aa3.74□□□□□ -1.81
CLCN6-201ENST00000312413 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
CLCN6-201ENST00000312413 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
CLCN6-201ENST00000312413 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
CLCN6-201ENST00000312413 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
CLCN6-201ENST00000312413 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
CLCN6-201ENST00000312413 MUC2Q02817 5179 aa3.62□□□□□ -1.83
CLCN6-201ENST00000312413 SYNE2Q8WXH0 6885 aaKnown RBP3.6□□□□□ -1.83
CLCN6-201ENST00000312413 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
CLCN6-201ENST00000312413 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
CLCN6-201ENST00000312413 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
CLCN6-201ENST00000312413 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
CLCN6-201ENST00000312413 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
CLCN6-201ENST00000312413 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
CLCN6-201ENST00000312413 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
CLCN6-201ENST00000312413 KRTAP5-9P26371 169 aa3.28□□□□□ -1.89
CLCN6-201ENST00000312413 USH2AO75445 5202 aa3.27□□□□□ -1.89
CLCN6-201ENST00000312413 KMT2DO14686 5537 aa3.26□□□□□ -1.89
CLCN6-201ENST00000312413 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
CLCN6-201ENST00000312413 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
CLCN6-201ENST00000312413 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
CLCN6-201ENST00000312413 MACF1Q9UPN3 7388 aaKnown RBP3.12□□□□□ -1.91
CLCN6-201ENST00000312413 NEBP20929 6669 aa3.1□□□□□ -1.91
CLCN6-201ENST00000312413 SSPOA2VEC9 5147 aa3.08□□□□□ -1.92
CLCN6-201ENST00000312413 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
CLCN6-201ENST00000312413 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
CLCN6-201ENST00000312413 KRTAP4-6Q9BYQ5 205 aa2.89□□□□□ -1.95
CLCN6-201ENST00000312413 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
CLCN6-201ENST00000312413 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
CLCN6-201ENST00000312413 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
CLCN6-201ENST00000312413 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
CLCN6-201ENST00000312413 MDN1Q9NU22 5596 aa2.77□□□□□ -1.97
CLCN6-201ENST00000312413 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
CLCN6-201ENST00000312413 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
CLCN6-201ENST00000312413 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
CLCN6-201ENST00000312413 KRTAP5-3Q6L8H2 238 aa2.49□□□□□ -2.01
CLCN6-201ENST00000312413 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
CLCN6-201ENST00000312413 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
CLCN6-201ENST00000312413 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
CLCN6-201ENST00000312413 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
CLCN6-201ENST00000312413 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
CLCN6-201ENST00000312413 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
CLCN6-201ENST00000312413 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
CLCN6-201ENST00000312413 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
CLCN6-201ENST00000312413 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
CLCN6-201ENST00000312413 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
CLCN6-201ENST00000312413 KRTAP5-1Q6L8H4 278 aa1.91□□□□□ -2.1
CLCN6-201ENST00000312413 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
CLCN6-201ENST00000312413 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
CLCN6-201ENST00000312413 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
CLCN6-201ENST00000312413 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
CLCN6-201ENST00000312413 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms