RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 HYDINQ4G0P3 5121 aa3.91□□□□□ -1.78
SPTBN2-201ENST00000309996 KRTAP19-6Q3LI70 58 aa3.9□□□□□ -1.78
SPTBN2-201ENST00000309996 MT1MQ8N339 61 aa3.86□□□□□ -1.79
SPTBN2-201ENST00000309996 LOC100996750A0A140TA64 210 aa3.85□□□□□ -1.79
SPTBN2-201ENST00000309996 HERC2O95714 4834 aa3.84□□□□□ -1.79
SPTBN2-201ENST00000309996 HERC1Q15751 4861 aa3.84□□□□□ -1.8
SPTBN2-201ENST00000309996 KMT2CQ8NEZ4 4911 aaKnown RBP3.79□□□□□ -1.8
SPTBN2-201ENST00000309996 KRTAP19-2Q3LHN2 52 aa3.78□□□□□ -1.8
SPTBN2-201ENST00000309996 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
SPTBN2-201ENST00000309996 PCLOQ9Y6V0 5065 aa3.76□□□□□ -1.81
SPTBN2-201ENST00000309996 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
SPTBN2-201ENST00000309996 MUC17Q685J3 4493 aa3.67□□□□□ -1.82
SPTBN2-201ENST00000309996 BIRC6Q9NR09 4857 aa3.65□□□□□ -1.83
SPTBN2-201ENST00000309996 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
SPTBN2-201ENST00000309996 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
SPTBN2-201ENST00000309996 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
SPTBN2-201ENST00000309996 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
SPTBN2-201ENST00000309996 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
SPTBN2-201ENST00000309996 MT1AP04731 61 aa3.6□□□□□ -1.83
SPTBN2-201ENST00000309996 EPPK1P58107 5090 aaKnown RBP3.53□□□□□ -1.84
SPTBN2-201ENST00000309996 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
SPTBN2-201ENST00000309996 KRTAP19-7Q3SYF9 63 aa3.51□□□□□ -1.85
SPTBN2-201ENST00000309996 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
SPTBN2-201ENST00000309996 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
SPTBN2-201ENST00000309996 ABCA13Q86UQ4 5058 aa3.46□□□□□ -1.86
SPTBN2-201ENST00000309996 HMCN2Q8NDA2 5059 aa3.45□□□□□ -1.86
SPTBN2-201ENST00000309996 LCE2AQ5TA79 106 aaPredicted RBP3.45□□□□□ -1.86
SPTBN2-201ENST00000309996 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
SPTBN2-201ENST00000309996 FSIP2Q5CZC0 6907 aa3.44□□□□□ -1.86
SPTBN2-201ENST00000309996 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
SPTBN2-201ENST00000309996 KRTAP6-3Q3LI67 103 aa3.4□□□□□ -1.87
SPTBN2-201ENST00000309996 FAT4Q6V0I7 4981 aa3.39□□□□□ -1.87
SPTBN2-201ENST00000309996 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
SPTBN2-201ENST00000309996 KRTAP9-4Q9BYQ2 154 aa3.36□□□□□ -1.87
SPTBN2-201ENST00000309996 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
SPTBN2-201ENST00000309996 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
SPTBN2-201ENST00000309996 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
SPTBN2-201ENST00000309996 RNF213Q63HN8 5207 aa3.32□□□□□ -1.88
SPTBN2-201ENST00000309996 MUC2Q02817 5179 aa3.3□□□□□ -1.88
SPTBN2-201ENST00000309996 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
SPTBN2-201ENST00000309996 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
SPTBN2-201ENST00000309996 FCGBPQ9Y6R7 5405 aaPredicted RBP2.99□□□□□ -1.93
SPTBN2-201ENST00000309996 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
SPTBN2-201ENST00000309996 KMT2DO14686 5537 aa2.93□□□□□ -1.94
SPTBN2-201ENST00000309996 USH2AO75445 5202 aa2.91□□□□□ -1.94
SPTBN2-201ENST00000309996 KRTAP4-6Q9BYQ5 205 aa2.89□□□□□ -1.95
SPTBN2-201ENST00000309996 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
SPTBN2-201ENST00000309996 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
SPTBN2-201ENST00000309996 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
SPTBN2-201ENST00000309996 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.95
SPTBN2-201ENST00000309996 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
SPTBN2-201ENST00000309996 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
SPTBN2-201ENST00000309996 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
SPTBN2-201ENST00000309996 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
SPTBN2-201ENST00000309996 MUC12Q9UKN1 5478 aa2.59□□□□□ -2
SPTBN2-201ENST00000309996 NEBP20929 6669 aa2.57□□□□□ -2
SPTBN2-201ENST00000309996 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
SPTBN2-201ENST00000309996 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
SPTBN2-201ENST00000309996 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
SPTBN2-201ENST00000309996 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
SPTBN2-201ENST00000309996 KRTAP5-3Q6L8H2 238 aa2.16□□□□□ -2.06
SPTBN2-201ENST00000309996 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
SPTBN2-201ENST00000309996 GPR98Q8WXG9 6306 aa2.08□□□□□ -2.08
SPTBN2-201ENST00000309996 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
SPTBN2-201ENST00000309996 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
SPTBN2-201ENST00000309996 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
SPTBN2-201ENST00000309996 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
SPTBN2-201ENST00000309996 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
SPTBN2-201ENST00000309996 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
SPTBN2-201ENST00000309996 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
SPTBN2-201ENST00000309996 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.15
SPTBN2-201ENST00000309996 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
SPTBN2-201ENST00000309996 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
SPTBN2-201ENST00000309996 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
SPTBN2-201ENST00000309996 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
SPTBN2-201ENST00000309996 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
SPTBN2-201ENST00000309996 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 162.3 ms