RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
SH3RF3-201ENST00000309415 KRTAP4-3Q9BYR4 195 aa6.26□□□□□ -1.41
SH3RF3-201ENST00000309415 MUC17Q685J3 4493 aa6.23□□□□□ -1.41
SH3RF3-201ENST00000309415 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.41
SH3RF3-201ENST00000309415 KMT2CQ8NEZ4 4911 aaKnown RBP6.2□□□□□ -1.42
SH3RF3-201ENST00000309415 FLGP20930 4061 aaPredicted RBP6.19□□□□□ -1.42
SH3RF3-201ENST00000309415 TNXBP22105 4242 aa6.19□□□□□ -1.42
SH3RF3-201ENST00000309415 PRM1P04553 51 aa6.17□□□□□ -1.42
SH3RF3-201ENST00000309415 LCE2AQ5TA79 106 aaPredicted RBP6.15□□□□□ -1.42
SH3RF3-201ENST00000309415 MT1AP04731 61 aa6.07□□□□□ -1.44
SH3RF3-201ENST00000309415 KRTAP9-7A8MTY7 169 aa6.05□□□□□ -1.44
SH3RF3-201ENST00000309415 ABCA13Q86UQ4 5058 aa6.03□□□□□ -1.44
SH3RF3-201ENST00000309415 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
SH3RF3-201ENST00000309415 KRTAP19-7Q3SYF9 63 aa5.99□□□□□ -1.45
SH3RF3-201ENST00000309415 KRTAP6-3Q3LI67 103 aa5.93□□□□□ -1.46
SH3RF3-201ENST00000309415 KRTAP2-3P0C7H8 128 aa5.9□□□□□ -1.46
SH3RF3-201ENST00000309415 KRTAP2-4Q9BYR9 128 aa5.9□□□□□ -1.46
SH3RF3-201ENST00000309415 KRTAP2-1Q9BYU5 128 aa5.87□□□□□ -1.47
SH3RF3-201ENST00000309415 LCE1AQ5T7P2 110 aa5.86□□□□□ -1.47
SH3RF3-201ENST00000309415 RNF213Q63HN8 5207 aa5.83□□□□□ -1.48
SH3RF3-201ENST00000309415 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
SH3RF3-201ENST00000309415 FAT4Q6V0I7 4981 aa5.81□□□□□ -1.48
SH3RF3-201ENST00000309415 SYNE2Q8WXH0 6885 aaKnown RBP5.77□□□□□ -1.48
SH3RF3-201ENST00000309415 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.74□□□□□ -1.49
SH3RF3-201ENST00000309415 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
SH3RF3-201ENST00000309415 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
SH3RF3-201ENST00000309415 UBR4Q5T4S7 5183 aa5.69□□□□□ -1.5
SH3RF3-201ENST00000309415 KRTAP2-2Q9BYT5 123 aa5.68□□□□□ -1.5
SH3RF3-201ENST00000309415 KRTAP6-2Q3LI66 62 aa5.66□□□□□ -1.5
SH3RF3-201ENST00000309415 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
SH3RF3-201ENST00000309415 HMCN2Q8NDA2 5059 aa5.64□□□□□ -1.51
SH3RF3-201ENST00000309415 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
SH3RF3-201ENST00000309415 KRTAP6-1Q3LI64 71 aa5.62□□□□□ -1.51
SH3RF3-201ENST00000309415 MUC2Q02817 5179 aa5.57□□□□□ -1.52
SH3RF3-201ENST00000309415 LCE1CQ5T751 118 aa5.53□□□□□ -1.52
SH3RF3-201ENST00000309415 LCE1EQ5T753 118 aa5.53□□□□□ -1.52
SH3RF3-201ENST00000309415 LCE1FQ5T754 118 aa5.53□□□□□ -1.52
SH3RF3-201ENST00000309415 KRTAP9-6A8MVA2 160 aa5.3□□□□□ -1.56
SH3RF3-201ENST00000309415 OBSCNQ5VST9 7968 aa5.29□□□□□ -1.56
SH3RF3-201ENST00000309415 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.58
SH3RF3-201ENST00000309415 NEBP20929 6669 aa4.83□□□□□ -1.64
SH3RF3-201ENST00000309415 USH2AO75445 5202 aa4.82□□□□□ -1.64
SH3RF3-201ENST00000309415 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
SH3RF3-201ENST00000309415 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
SH3RF3-201ENST00000309415 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
SH3RF3-201ENST00000309415 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
SH3RF3-201ENST00000309415 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
SH3RF3-201ENST00000309415 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
SH3RF3-201ENST00000309415 SSPOA2VEC9 5147 aa4.54□□□□□ -1.68
SH3RF3-201ENST00000309415 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
SH3RF3-201ENST00000309415 KMT2DO14686 5537 aa4.41□□□□□ -1.7
SH3RF3-201ENST00000309415 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
SH3RF3-201ENST00000309415 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
SH3RF3-201ENST00000309415 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
SH3RF3-201ENST00000309415 KRTAP4-4Q9BYR3 166 aa4.34□□□□□ -1.71
SH3RF3-201ENST00000309415 GPR98Q8WXG9 6306 aa4.22□□□□□ -1.73
SH3RF3-201ENST00000309415 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
SH3RF3-201ENST00000309415 MUC19Q7Z5P9 8384 aa4.12□□□□□ -1.75
SH3RF3-201ENST00000309415 MUC12Q9UKN1 5478 aa4.04□□□□□ -1.76
SH3RF3-201ENST00000309415 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
SH3RF3-201ENST00000309415 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
SH3RF3-201ENST00000309415 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
SH3RF3-201ENST00000309415 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
SH3RF3-201ENST00000309415 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
SH3RF3-201ENST00000309415 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
SH3RF3-201ENST00000309415 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
SH3RF3-201ENST00000309415 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
SH3RF3-201ENST00000309415 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
SH3RF3-201ENST00000309415 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
SH3RF3-201ENST00000309415 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
SH3RF3-201ENST00000309415 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
SH3RF3-201ENST00000309415 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
SH3RF3-201ENST00000309415 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
SH3RF3-201ENST00000309415 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
SH3RF3-201ENST00000309415 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
SH3RF3-201ENST00000309415 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
SH3RF3-201ENST00000309415 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms