RNA–Protein interactions for RNA: ENST00000306773.4

NPTX1-201, Transcript of neuronal pentraxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPTX1, Length 5,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1-201ENST00000306773 MT1MQ8N339 61 aa6.07□□□□□ -1.44
NPTX1-201ENST00000306773 LCE3EQ5T5B0 92 aa6.06□□□□□ -1.44
NPTX1-201ENST00000306773 FAT4Q6V0I7 4981 aa6.04□□□□□ -1.44
NPTX1-201ENST00000306773 RNF213Q63HN8 5207 aa6.04□□□□□ -1.44
NPTX1-201ENST00000306773 UBR4Q5T4S7 5183 aa6.01□□□□□ -1.45
NPTX1-201ENST00000306773 HMCN2Q8NDA2 5059 aa5.88□□□□□ -1.47
NPTX1-201ENST00000306773 MT3P25713 68 aa5.87□□□□□ -1.47
NPTX1-201ENST00000306773 KRTAP19-7Q3SYF9 63 aa5.86□□□□□ -1.47
NPTX1-201ENST00000306773 FSIP2Q5CZC0 6907 aa5.84□□□□□ -1.47
NPTX1-201ENST00000306773 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
NPTX1-201ENST00000306773 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
NPTX1-201ENST00000306773 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
NPTX1-201ENST00000306773 MT4P47944 62 aa5.71□□□□□ -1.5
NPTX1-201ENST00000306773 MT1AP04731 61 aa5.66□□□□□ -1.5
NPTX1-201ENST00000306773 MUC2Q02817 5179 aa5.62□□□□□ -1.51
NPTX1-201ENST00000306773 PRM1P04553 51 aa5.61□□□□□ -1.51
NPTX1-201ENST00000306773 LCE1AQ5T7P2 110 aa5.59□□□□□ -1.51
NPTX1-201ENST00000306773 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
NPTX1-201ENST00000306773 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
NPTX1-201ENST00000306773 KRTAP2-1Q9BYU5 128 aa5.58□□□□□ -1.52
NPTX1-201ENST00000306773 KRTAP6-3Q3LI67 103 aa5.52□□□□□ -1.53
NPTX1-201ENST00000306773 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
NPTX1-201ENST00000306773 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
NPTX1-201ENST00000306773 KRTAP4-9Q9BYQ8 210 aa5.44□□□□□ -1.54
NPTX1-201ENST00000306773 KRTAP9-7A8MTY7 169 aa5.42□□□□□ -1.54
NPTX1-201ENST00000306773 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
NPTX1-201ENST00000306773 KRTAP20-1Q3LI63 56 aa5.39□□□□□ -1.55
NPTX1-201ENST00000306773 LCE5AQ5TCM9 118 aa5.39□□□□□ -1.55
NPTX1-201ENST00000306773 LCE1BQ5T7P3 118 aa5.38□□□□□ -1.55
NPTX1-201ENST00000306773 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
NPTX1-201ENST00000306773 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
NPTX1-201ENST00000306773 FCGBPQ9Y6R7 5405 aaPredicted RBP5.25□□□□□ -1.57
NPTX1-201ENST00000306773 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
NPTX1-201ENST00000306773 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
NPTX1-201ENST00000306773 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
NPTX1-201ENST00000306773 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
NPTX1-201ENST00000306773 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
NPTX1-201ENST00000306773 USH2AO75445 5202 aa5.13□□□□□ -1.59
NPTX1-201ENST00000306773 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
NPTX1-201ENST00000306773 KMT2DO14686 5537 aa4.94□□□□□ -1.62
NPTX1-201ENST00000306773 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
NPTX1-201ENST00000306773 MACF1Q9UPN3 7388 aaKnown RBP4.8□□□□□ -1.64
NPTX1-201ENST00000306773 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
NPTX1-201ENST00000306773 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
NPTX1-201ENST00000306773 NEBP20929 6669 aa4.6□□□□□ -1.67
NPTX1-201ENST00000306773 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
NPTX1-201ENST00000306773 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
NPTX1-201ENST00000306773 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
NPTX1-201ENST00000306773 KRTAP20-2Q3LI61 65 aa4.41□□□□□ -1.7
NPTX1-201ENST00000306773 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
NPTX1-201ENST00000306773 MUC19Q7Z5P9 8384 aa4.39□□□□□ -1.71
NPTX1-201ENST00000306773 KRTAP4-6Q9BYQ5 205 aa4.39□□□□□ -1.71
NPTX1-201ENST00000306773 MDN1Q9NU22 5596 aa4.39□□□□□ -1.71
NPTX1-201ENST00000306773 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
NPTX1-201ENST00000306773 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
NPTX1-201ENST00000306773 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
NPTX1-201ENST00000306773 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
NPTX1-201ENST00000306773 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
NPTX1-201ENST00000306773 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
NPTX1-201ENST00000306773 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
NPTX1-201ENST00000306773 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
NPTX1-201ENST00000306773 KRTAP5-3Q6L8H2 238 aa3.64□□□□□ -1.83
NPTX1-201ENST00000306773 HMCN1Q96RW7 5635 aa3.54□□□□□ -1.84
NPTX1-201ENST00000306773 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
NPTX1-201ENST00000306773 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
NPTX1-201ENST00000306773 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
NPTX1-201ENST00000306773 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.89
NPTX1-201ENST00000306773 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
NPTX1-201ENST00000306773 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
NPTX1-201ENST00000306773 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
NPTX1-201ENST00000306773 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
NPTX1-201ENST00000306773 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
NPTX1-201ENST00000306773 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
NPTX1-201ENST00000306773 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
NPTX1-201ENST00000306773 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
NPTX1-201ENST00000306773 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
NPTX1-201ENST00000306773 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 228.4 ms