RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 MT1AP04731 61 aa5.79□□□□□ -1.48
CTNND2-201ENST00000304623 LCE1BQ5T7P3 118 aa5.79□□□□□ -1.48
CTNND2-201ENST00000304623 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
CTNND2-201ENST00000304623 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
CTNND2-201ENST00000304623 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
CTNND2-201ENST00000304623 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
CTNND2-201ENST00000304623 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
CTNND2-201ENST00000304623 LCE1DQ5T752 114 aa5.75□□□□□ -1.49
CTNND2-201ENST00000304623 HYDINQ4G0P3 5121 aa5.73□□□□□ -1.49
CTNND2-201ENST00000304623 PKHD1P08F94 4074 aa5.69□□□□□ -1.5
CTNND2-201ENST00000304623 TNXBP22105 4242 aa5.67□□□□□ -1.5
CTNND2-201ENST00000304623 ABCA13Q86UQ4 5058 aa5.62□□□□□ -1.51
CTNND2-201ENST00000304623 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.51
CTNND2-201ENST00000304623 KRTAP9-2Q9BYQ4 174 aa5.52□□□□□ -1.53
CTNND2-201ENST00000304623 LCE2AQ5TA79 106 aaPredicted RBP5.47□□□□□ -1.53
CTNND2-201ENST00000304623 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
CTNND2-201ENST00000304623 LCE5AQ5TCM9 118 aa5.39□□□□□ -1.55
CTNND2-201ENST00000304623 HMCN2Q8NDA2 5059 aa5.37□□□□□ -1.55
CTNND2-201ENST00000304623 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
CTNND2-201ENST00000304623 FAT4Q6V0I7 4981 aa5.35□□□□□ -1.55
CTNND2-201ENST00000304623 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
CTNND2-201ENST00000304623 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.55
CTNND2-201ENST00000304623 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.55
CTNND2-201ENST00000304623 KRTAP6-1Q3LI64 71 aa5.34□□□□□ -1.55
CTNND2-201ENST00000304623 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
CTNND2-201ENST00000304623 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
CTNND2-201ENST00000304623 KRTAP9-6A0A140TA67 174 aa5.17□□□□□ -1.58
CTNND2-201ENST00000304623 MUC2Q02817 5179 aa5.16□□□□□ -1.58
CTNND2-201ENST00000304623 KRTAP20-1Q3LI63 56 aa5.14□□□□□ -1.59
CTNND2-201ENST00000304623 KRTAP6-3Q3LI67 103 aa5.12□□□□□ -1.59
CTNND2-201ENST00000304623 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
CTNND2-201ENST00000304623 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
CTNND2-201ENST00000304623 FSIP2Q5CZC0 6907 aa5.06□□□□□ -1.6
CTNND2-201ENST00000304623 SYNE2Q8WXH0 6885 aaKnown RBP5.05□□□□□ -1.6
CTNND2-201ENST00000304623 LCE1CQ5T751 118 aa4.91□□□□□ -1.62
CTNND2-201ENST00000304623 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
CTNND2-201ENST00000304623 LCE1FQ5T754 118 aa4.91□□□□□ -1.62
CTNND2-201ENST00000304623 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
CTNND2-201ENST00000304623 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
CTNND2-201ENST00000304623 USH2AO75445 5202 aa4.66□□□□□ -1.66
CTNND2-201ENST00000304623 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
CTNND2-201ENST00000304623 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
CTNND2-201ENST00000304623 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
CTNND2-201ENST00000304623 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
CTNND2-201ENST00000304623 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
CTNND2-201ENST00000304623 MUC19Q7Z5P9 8384 aa4.23□□□□□ -1.73
CTNND2-201ENST00000304623 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
CTNND2-201ENST00000304623 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
CTNND2-201ENST00000304623 MACF1Q9UPN3 7388 aaKnown RBP4.2□□□□□ -1.74
CTNND2-201ENST00000304623 KMT2DO14686 5537 aa4.17□□□□□ -1.74
CTNND2-201ENST00000304623 SSPOA2VEC9 5147 aa4.15□□□□□ -1.74
CTNND2-201ENST00000304623 NEBP20929 6669 aa4.15□□□□□ -1.75
CTNND2-201ENST00000304623 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
CTNND2-201ENST00000304623 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
CTNND2-201ENST00000304623 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
CTNND2-201ENST00000304623 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
CTNND2-201ENST00000304623 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
CTNND2-201ENST00000304623 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
CTNND2-201ENST00000304623 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
CTNND2-201ENST00000304623 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
CTNND2-201ENST00000304623 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.86
CTNND2-201ENST00000304623 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
CTNND2-201ENST00000304623 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
CTNND2-201ENST00000304623 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
CTNND2-201ENST00000304623 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
CTNND2-201ENST00000304623 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
CTNND2-201ENST00000304623 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
CTNND2-201ENST00000304623 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
CTNND2-201ENST00000304623 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
CTNND2-201ENST00000304623 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
CTNND2-201ENST00000304623 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
CTNND2-201ENST00000304623 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
CTNND2-201ENST00000304623 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
CTNND2-201ENST00000304623 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
CTNND2-201ENST00000304623 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
CTNND2-201ENST00000304623 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
CTNND2-201ENST00000304623 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 5.4 ms