RNA–Protein interactions for RNA: ENST00000300843.8

MARK4-202, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 1 (best) BASIC

Gene MARK4, Length 5,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-202ENST00000300843 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
MARK4-202ENST00000300843 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
MARK4-202ENST00000300843 FLGP20930 4061 aaPredicted RBP5.03□□□□□ -1.6
MARK4-202ENST00000300843 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
MARK4-202ENST00000300843 LCE3EQ5T5B0 92 aa4.99□□□□□ -1.61
MARK4-202ENST00000300843 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
MARK4-202ENST00000300843 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.62
MARK4-202ENST00000300843 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
MARK4-202ENST00000300843 RNF213Q63HN8 5207 aa4.87□□□□□ -1.63
MARK4-202ENST00000300843 MT1MQ8N339 61 aa4.87□□□□□ -1.63
MARK4-202ENST00000300843 MT4P47944 62 aa4.85□□□□□ -1.63
MARK4-202ENST00000300843 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
MARK4-202ENST00000300843 MT3P25713 68 aa4.82□□□□□ -1.64
MARK4-202ENST00000300843 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
MARK4-202ENST00000300843 FAT4Q6V0I7 4981 aa4.8□□□□□ -1.64
MARK4-202ENST00000300843 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
MARK4-202ENST00000300843 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
MARK4-202ENST00000300843 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
MARK4-202ENST00000300843 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
MARK4-202ENST00000300843 HMCN2Q8NDA2 5059 aa4.69□□□□□ -1.66
MARK4-202ENST00000300843 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
MARK4-202ENST00000300843 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
MARK4-202ENST00000300843 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
MARK4-202ENST00000300843 MUC2Q02817 5179 aa4.61□□□□□ -1.67
MARK4-202ENST00000300843 PRM1P04553 51 aa4.55□□□□□ -1.68
MARK4-202ENST00000300843 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
MARK4-202ENST00000300843 MT1AP04731 61 aa4.52□□□□□ -1.69
MARK4-202ENST00000300843 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
MARK4-202ENST00000300843 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
MARK4-202ENST00000300843 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
MARK4-202ENST00000300843 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
MARK4-202ENST00000300843 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
MARK4-202ENST00000300843 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
MARK4-202ENST00000300843 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
MARK4-202ENST00000300843 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
MARK4-202ENST00000300843 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.73
MARK4-202ENST00000300843 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
MARK4-202ENST00000300843 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
MARK4-202ENST00000300843 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
MARK4-202ENST00000300843 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
MARK4-202ENST00000300843 NEBP20929 6669 aa4.1□□□□□ -1.75
MARK4-202ENST00000300843 KMT2DO14686 5537 aa4.1□□□□□ -1.75
MARK4-202ENST00000300843 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
MARK4-202ENST00000300843 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
MARK4-202ENST00000300843 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
MARK4-202ENST00000300843 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
MARK4-202ENST00000300843 USH2AO75445 5202 aa4.04□□□□□ -1.76
MARK4-202ENST00000300843 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
MARK4-202ENST00000300843 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
MARK4-202ENST00000300843 MUC12Q9UKN1 5478 aa3.75□□□□□ -1.81
MARK4-202ENST00000300843 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
MARK4-202ENST00000300843 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
MARK4-202ENST00000300843 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
MARK4-202ENST00000300843 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
MARK4-202ENST00000300843 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
MARK4-202ENST00000300843 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
MARK4-202ENST00000300843 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.88
MARK4-202ENST00000300843 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
MARK4-202ENST00000300843 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
MARK4-202ENST00000300843 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
MARK4-202ENST00000300843 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
MARK4-202ENST00000300843 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.93
MARK4-202ENST00000300843 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.93
MARK4-202ENST00000300843 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
MARK4-202ENST00000300843 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
MARK4-202ENST00000300843 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
MARK4-202ENST00000300843 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
MARK4-202ENST00000300843 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
MARK4-202ENST00000300843 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
MARK4-202ENST00000300843 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
MARK4-202ENST00000300843 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
MARK4-202ENST00000300843 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
MARK4-202ENST00000300843 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
MARK4-202ENST00000300843 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
MARK4-202ENST00000300843 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
MARK4-202ENST00000300843 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
MARK4-202ENST00000300843 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms