RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 RYR2Q92736 4967 aa4.34□□□□□ -1.72
SPRED1-201ENST00000299084 MT1MQ8N339 61 aa4.29□□□□□ -1.72
SPRED1-201ENST00000299084 KIAA1109Q2LD37 5005 aa4.29□□□□□ -1.72
SPRED1-201ENST00000299084 KRTAP19-2Q3LHN2 52 aa4.28□□□□□ -1.72
SPRED1-201ENST00000299084 KMT2CQ8NEZ4 4911 aaKnown RBP4.26□□□□□ -1.73
SPRED1-201ENST00000299084 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
SPRED1-201ENST00000299084 HERC2O95714 4834 aa4.22□□□□□ -1.73
SPRED1-201ENST00000299084 MUC17Q685J3 4493 aa4.2□□□□□ -1.74
SPRED1-201ENST00000299084 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
SPRED1-201ENST00000299084 KRTAP2-3P0C7H8 128 aa4.12□□□□□ -1.75
SPRED1-201ENST00000299084 KRTAP2-4Q9BYR9 128 aa4.12□□□□□ -1.75
SPRED1-201ENST00000299084 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
SPRED1-201ENST00000299084 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
SPRED1-201ENST00000299084 PCLOQ9Y6V0 5065 aa4.04□□□□□ -1.76
SPRED1-201ENST00000299084 MT1AP04731 61 aa4.01□□□□□ -1.77
SPRED1-201ENST00000299084 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
SPRED1-201ENST00000299084 HERC1Q15751 4861 aa4□□□□□ -1.77
SPRED1-201ENST00000299084 KRTAP2-1Q9BYU5 128 aa3.96□□□□□ -1.78
SPRED1-201ENST00000299084 KRTAP9-9Q9BYP9 154 aa3.93□□□□□ -1.78
SPRED1-201ENST00000299084 BIRC6Q9NR09 4857 aa3.92□□□□□ -1.78
SPRED1-201ENST00000299084 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
SPRED1-201ENST00000299084 SYNE2Q8WXH0 6885 aaKnown RBP3.9□□□□□ -1.78
SPRED1-201ENST00000299084 LCE2AQ5TA79 106 aaPredicted RBP3.9□□□□□ -1.78
SPRED1-201ENST00000299084 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
SPRED1-201ENST00000299084 HMCN2Q8NDA2 5059 aa3.87□□□□□ -1.79
SPRED1-201ENST00000299084 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
SPRED1-201ENST00000299084 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
SPRED1-201ENST00000299084 KRTAP19-7Q3SYF9 63 aa3.85□□□□□ -1.79
SPRED1-201ENST00000299084 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
SPRED1-201ENST00000299084 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
SPRED1-201ENST00000299084 EPPK1P58107 5090 aaKnown RBP3.72□□□□□ -1.81
SPRED1-201ENST00000299084 FSIP2Q5CZC0 6907 aa3.7□□□□□ -1.82
SPRED1-201ENST00000299084 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
SPRED1-201ENST00000299084 FAT4Q6V0I7 4981 aa3.66□□□□□ -1.82
SPRED1-201ENST00000299084 MUC2Q02817 5179 aa3.57□□□□□ -1.84
SPRED1-201ENST00000299084 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
SPRED1-201ENST00000299084 ABCA13Q86UQ4 5058 aa3.52□□□□□ -1.85
SPRED1-201ENST00000299084 UBR4Q5T4S7 5183 aa3.5□□□□□ -1.85
SPRED1-201ENST00000299084 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
SPRED1-201ENST00000299084 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
SPRED1-201ENST00000299084 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
SPRED1-201ENST00000299084 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
SPRED1-201ENST00000299084 KMT2DO14686 5537 aa3.28□□□□□ -1.88
SPRED1-201ENST00000299084 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
SPRED1-201ENST00000299084 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
SPRED1-201ENST00000299084 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
SPRED1-201ENST00000299084 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
SPRED1-201ENST00000299084 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.91
SPRED1-201ENST00000299084 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
SPRED1-201ENST00000299084 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
SPRED1-201ENST00000299084 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
SPRED1-201ENST00000299084 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
SPRED1-201ENST00000299084 USH2AO75445 5202 aa2.88□□□□□ -1.95
SPRED1-201ENST00000299084 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
SPRED1-201ENST00000299084 NEBP20929 6669 aa2.81□□□□□ -1.96
SPRED1-201ENST00000299084 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
SPRED1-201ENST00000299084 MUC12Q9UKN1 5478 aa2.79□□□□□ -1.96
SPRED1-201ENST00000299084 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
SPRED1-201ENST00000299084 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
SPRED1-201ENST00000299084 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
SPRED1-201ENST00000299084 MDN1Q9NU22 5596 aa2.41□□□□□ -2.02
SPRED1-201ENST00000299084 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
SPRED1-201ENST00000299084 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
SPRED1-201ENST00000299084 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
SPRED1-201ENST00000299084 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
SPRED1-201ENST00000299084 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
SPRED1-201ENST00000299084 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
SPRED1-201ENST00000299084 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.11
SPRED1-201ENST00000299084 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
SPRED1-201ENST00000299084 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
SPRED1-201ENST00000299084 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
SPRED1-201ENST00000299084 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
SPRED1-201ENST00000299084 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
SPRED1-201ENST00000299084 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
SPRED1-201ENST00000299084 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
SPRED1-201ENST00000299084 KRTAP5-7Q6L8G8 165 aa1.49□□□□□ -2.17
SPRED1-201ENST00000299084 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms