RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 LCE2DQ5TA82 110 aaPredicted RBP5.16□□□□□ -1.58
ARHGEF28-201ENST00000296794 LCE2AQ5TA79 106 aaPredicted RBP5.14□□□□□ -1.59
ARHGEF28-201ENST00000296794 LCE3EQ5T5B0 92 aa5.13□□□□□ -1.59
ARHGEF28-201ENST00000296794 RNF213Q63HN8 5207 aa5.11□□□□□ -1.59
ARHGEF28-201ENST00000296794 FAT4Q6V0I7 4981 aa5.09□□□□□ -1.59
ARHGEF28-201ENST00000296794 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
ARHGEF28-201ENST00000296794 MT1MQ8N339 61 aa5.03□□□□□ -1.6
ARHGEF28-201ENST00000296794 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
ARHGEF28-201ENST00000296794 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
ARHGEF28-201ENST00000296794 MT4P47944 62 aa4.95□□□□□ -1.62
ARHGEF28-201ENST00000296794 MUC2Q02817 5179 aa4.95□□□□□ -1.62
ARHGEF28-201ENST00000296794 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
ARHGEF28-201ENST00000296794 MT3P25713 68 aa4.94□□□□□ -1.62
ARHGEF28-201ENST00000296794 KRTAP19-7Q3SYF9 63 aa4.93□□□□□ -1.62
ARHGEF28-201ENST00000296794 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
ARHGEF28-201ENST00000296794 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
ARHGEF28-201ENST00000296794 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
ARHGEF28-201ENST00000296794 PRM1P04553 51 aa4.81□□□□□ -1.64
ARHGEF28-201ENST00000296794 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
ARHGEF28-201ENST00000296794 SYNE2Q8WXH0 6885 aaKnown RBP4.75□□□□□ -1.65
ARHGEF28-201ENST00000296794 KRTAP20-1Q3LI63 56 aa4.7□□□□□ -1.66
ARHGEF28-201ENST00000296794 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
ARHGEF28-201ENST00000296794 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
ARHGEF28-201ENST00000296794 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
ARHGEF28-201ENST00000296794 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
ARHGEF28-201ENST00000296794 MT1AP04731 61 aa4.67□□□□□ -1.66
ARHGEF28-201ENST00000296794 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
ARHGEF28-201ENST00000296794 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
ARHGEF28-201ENST00000296794 LCE1BQ5T7P3 118 aa4.66□□□□□ -1.66
ARHGEF28-201ENST00000296794 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.59□□□□□ -1.68
ARHGEF28-201ENST00000296794 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
ARHGEF28-201ENST00000296794 KRTAP6-1Q3LI64 71 aa4.44□□□□□ -1.7
ARHGEF28-201ENST00000296794 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
ARHGEF28-201ENST00000296794 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
ARHGEF28-201ENST00000296794 USH2AO75445 5202 aa4.38□□□□□ -1.71
ARHGEF28-201ENST00000296794 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
ARHGEF28-201ENST00000296794 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
ARHGEF28-201ENST00000296794 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
ARHGEF28-201ENST00000296794 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
ARHGEF28-201ENST00000296794 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
ARHGEF28-201ENST00000296794 KMT2DO14686 5537 aa4.25□□□□□ -1.73
ARHGEF28-201ENST00000296794 NEBP20929 6669 aa4.03□□□□□ -1.76
ARHGEF28-201ENST00000296794 MDN1Q9NU22 5596 aa4.02□□□□□ -1.77
ARHGEF28-201ENST00000296794 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
ARHGEF28-201ENST00000296794 GPR98Q8WXG9 6306 aa3.97□□□□□ -1.77
ARHGEF28-201ENST00000296794 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
ARHGEF28-201ENST00000296794 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
ARHGEF28-201ENST00000296794 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
ARHGEF28-201ENST00000296794 SSPOA2VEC9 5147 aa3.9□□□□□ -1.78
ARHGEF28-201ENST00000296794 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
ARHGEF28-201ENST00000296794 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.8
ARHGEF28-201ENST00000296794 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
ARHGEF28-201ENST00000296794 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
ARHGEF28-201ENST00000296794 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
ARHGEF28-201ENST00000296794 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
ARHGEF28-201ENST00000296794 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
ARHGEF28-201ENST00000296794 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
ARHGEF28-201ENST00000296794 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
ARHGEF28-201ENST00000296794 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
ARHGEF28-201ENST00000296794 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
ARHGEF28-201ENST00000296794 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
ARHGEF28-201ENST00000296794 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.9
ARHGEF28-201ENST00000296794 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
ARHGEF28-201ENST00000296794 KRTAP5-3Q6L8H2 238 aa3.13□□□□□ -1.91
ARHGEF28-201ENST00000296794 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
ARHGEF28-201ENST00000296794 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
ARHGEF28-201ENST00000296794 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
ARHGEF28-201ENST00000296794 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
ARHGEF28-201ENST00000296794 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
ARHGEF28-201ENST00000296794 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
ARHGEF28-201ENST00000296794 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
ARHGEF28-201ENST00000296794 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
ARHGEF28-201ENST00000296794 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
ARHGEF28-201ENST00000296794 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
ARHGEF28-201ENST00000296794 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
ARHGEF28-201ENST00000296794 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
ARHGEF28-201ENST00000296794 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 88.8 ms