RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 MT1EP04732 61 aa3.71□□□□□ -1.82
SLX4-201ENST00000294008 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
SLX4-201ENST00000294008 MT1MQ8N339 61 aa3.7□□□□□ -1.82
SLX4-201ENST00000294008 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
SLX4-201ENST00000294008 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.82
SLX4-201ENST00000294008 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
SLX4-201ENST00000294008 RYR2Q92736 4967 aa3.63□□□□□ -1.83
SLX4-201ENST00000294008 KMT2CQ8NEZ4 4911 aaKnown RBP3.6□□□□□ -1.83
SLX4-201ENST00000294008 HERC2O95714 4834 aa3.59□□□□□ -1.83
SLX4-201ENST00000294008 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
SLX4-201ENST00000294008 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
SLX4-201ENST00000294008 LCE2AQ5TA79 106 aaPredicted RBP3.47□□□□□ -1.85
SLX4-201ENST00000294008 KRTAP19-2Q3LHN2 52 aa3.46□□□□□ -1.86
SLX4-201ENST00000294008 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
SLX4-201ENST00000294008 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
SLX4-201ENST00000294008 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
SLX4-201ENST00000294008 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
SLX4-201ENST00000294008 MT1AP04731 61 aa3.4□□□□□ -1.86
SLX4-201ENST00000294008 HERC1Q15751 4861 aa3.38□□□□□ -1.87
SLX4-201ENST00000294008 BIRC6Q9NR09 4857 aa3.37□□□□□ -1.87
SLX4-201ENST00000294008 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
SLX4-201ENST00000294008 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
SLX4-201ENST00000294008 EPPK1P58107 5090 aaKnown RBP3.33□□□□□ -1.88
SLX4-201ENST00000294008 MUC17Q685J3 4493 aa3.31□□□□□ -1.88
SLX4-201ENST00000294008 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
SLX4-201ENST00000294008 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
SLX4-201ENST00000294008 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
SLX4-201ENST00000294008 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
SLX4-201ENST00000294008 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
SLX4-201ENST00000294008 HMCN2Q8NDA2 5059 aa3.2□□□□□ -1.9
SLX4-201ENST00000294008 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
SLX4-201ENST00000294008 ABCA13Q86UQ4 5058 aa3.17□□□□□ -1.9
SLX4-201ENST00000294008 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.17□□□□□ -1.9
SLX4-201ENST00000294008 KRTAP6-3Q3LI67 103 aa3.17□□□□□ -1.9
SLX4-201ENST00000294008 MUC2Q02817 5179 aa3.14□□□□□ -1.91
SLX4-201ENST00000294008 FAT4Q6V0I7 4981 aa3.14□□□□□ -1.91
SLX4-201ENST00000294008 UBR4Q5T4S7 5183 aa3.06□□□□□ -1.92
SLX4-201ENST00000294008 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
SLX4-201ENST00000294008 KRTAP4-11Q9BYQ6 195 aa3.03□□□□□ -1.92
SLX4-201ENST00000294008 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
SLX4-201ENST00000294008 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
SLX4-201ENST00000294008 RNF213Q63HN8 5207 aa2.97□□□□□ -1.93
SLX4-201ENST00000294008 KRTAP4-6Q9BYQ5 205 aa2.97□□□□□ -1.93
SLX4-201ENST00000294008 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
SLX4-201ENST00000294008 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
SLX4-201ENST00000294008 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
SLX4-201ENST00000294008 KMT2DO14686 5537 aa2.83□□□□□ -1.96
SLX4-201ENST00000294008 MACF1Q9UPN3 7388 aaKnown RBP2.72□□□□□ -1.97
SLX4-201ENST00000294008 FCGBPQ9Y6R7 5405 aaPredicted RBP2.69□□□□□ -1.98
SLX4-201ENST00000294008 DSTQ03001 7570 aaKnown RBP2.65□□□□□ -1.98
SLX4-201ENST00000294008 USH2AO75445 5202 aa2.64□□□□□ -1.99
SLX4-201ENST00000294008 NEBP20929 6669 aa2.48□□□□□ -2.01
SLX4-201ENST00000294008 MUC12Q9UKN1 5478 aa2.46□□□□□ -2.02
SLX4-201ENST00000294008 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
SLX4-201ENST00000294008 SSPOA2VEC9 5147 aa2.45□□□□□ -2.02
SLX4-201ENST00000294008 KRTAP5-9P26371 169 aa2.37□□□□□ -2.03
SLX4-201ENST00000294008 GPR98Q8WXG9 6306 aa2.32□□□□□ -2.04
SLX4-201ENST00000294008 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
SLX4-201ENST00000294008 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
SLX4-201ENST00000294008 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
SLX4-201ENST00000294008 MDN1Q9NU22 5596 aa2.06□□□□□ -2.08
SLX4-201ENST00000294008 KRTAP5-3Q6L8H2 238 aa2.05□□□□□ -2.08
SLX4-201ENST00000294008 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
SLX4-201ENST00000294008 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
SLX4-201ENST00000294008 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
SLX4-201ENST00000294008 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
SLX4-201ENST00000294008 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
SLX4-201ENST00000294008 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
SLX4-201ENST00000294008 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
SLX4-201ENST00000294008 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
SLX4-201ENST00000294008 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
SLX4-201ENST00000294008 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
SLX4-201ENST00000294008 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
SLX4-201ENST00000294008 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
SLX4-201ENST00000294008 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
SLX4-201ENST00000294008 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
SLX4-201ENST00000294008 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 44.4 ms