RNA–Protein interactions for RNA: ENST00000287263.8

RAB11FIP1-201, Transcript of RAB11 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP1, Length 6,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-201ENST00000287263 MT1MQ8N339 61 aa4.42□□□□□ -1.7
RAB11FIP1-201ENST00000287263 FSIP2Q5CZC0 6907 aa4.42□□□□□ -1.7
RAB11FIP1-201ENST00000287263 SYNE2Q8WXH0 6885 aaKnown RBP4.39□□□□□ -1.71
RAB11FIP1-201ENST00000287263 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
RAB11FIP1-201ENST00000287263 FLGP20930 4061 aaPredicted RBP4.36□□□□□ -1.71
RAB11FIP1-201ENST00000287263 MT3P25713 68 aa4.36□□□□□ -1.71
RAB11FIP1-201ENST00000287263 MUC17Q685J3 4493 aa4.34□□□□□ -1.71
RAB11FIP1-201ENST00000287263 KRTAP19-6Q3LI70 58 aa4.31□□□□□ -1.72
RAB11FIP1-201ENST00000287263 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
RAB11FIP1-201ENST00000287263 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.72
RAB11FIP1-201ENST00000287263 EPPK1P58107 5090 aaKnown RBP4.25□□□□□ -1.73
RAB11FIP1-201ENST00000287263 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
RAB11FIP1-201ENST00000287263 ABCA13Q86UQ4 5058 aa4.14□□□□□ -1.75
RAB11FIP1-201ENST00000287263 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.75
RAB11FIP1-201ENST00000287263 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
RAB11FIP1-201ENST00000287263 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
RAB11FIP1-201ENST00000287263 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
RAB11FIP1-201ENST00000287263 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
RAB11FIP1-201ENST00000287263 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
RAB11FIP1-201ENST00000287263 LCE2AQ5TA79 106 aaPredicted RBP4.05□□□□□ -1.76
RAB11FIP1-201ENST00000287263 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
RAB11FIP1-201ENST00000287263 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
RAB11FIP1-201ENST00000287263 MUC2Q02817 5179 aa4.03□□□□□ -1.76
RAB11FIP1-201ENST00000287263 MT1AP04731 61 aa4□□□□□ -1.77
RAB11FIP1-201ENST00000287263 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
RAB11FIP1-201ENST00000287263 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
RAB11FIP1-201ENST00000287263 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
RAB11FIP1-201ENST00000287263 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
RAB11FIP1-201ENST00000287263 RNF213Q63HN8 5207 aa3.97□□□□□ -1.77
RAB11FIP1-201ENST00000287263 UBR4Q5T4S7 5183 aa3.96□□□□□ -1.78
RAB11FIP1-201ENST00000287263 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
RAB11FIP1-201ENST00000287263 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
RAB11FIP1-201ENST00000287263 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
RAB11FIP1-201ENST00000287263 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
RAB11FIP1-201ENST00000287263 LCE4AQ5TA78 99 aa3.81□□□□□ -1.8
RAB11FIP1-201ENST00000287263 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
RAB11FIP1-201ENST00000287263 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
RAB11FIP1-201ENST00000287263 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
RAB11FIP1-201ENST00000287263 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
RAB11FIP1-201ENST00000287263 KMT2DO14686 5537 aa3.56□□□□□ -1.84
RAB11FIP1-201ENST00000287263 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
RAB11FIP1-201ENST00000287263 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
RAB11FIP1-201ENST00000287263 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
RAB11FIP1-201ENST00000287263 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
RAB11FIP1-201ENST00000287263 USH2AO75445 5202 aa3.43□□□□□ -1.86
RAB11FIP1-201ENST00000287263 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
RAB11FIP1-201ENST00000287263 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
RAB11FIP1-201ENST00000287263 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
RAB11FIP1-201ENST00000287263 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
RAB11FIP1-201ENST00000287263 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
RAB11FIP1-201ENST00000287263 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
RAB11FIP1-201ENST00000287263 NEBP20929 6669 aa3.26□□□□□ -1.89
RAB11FIP1-201ENST00000287263 SSPOA2VEC9 5147 aa3.23□□□□□ -1.89
RAB11FIP1-201ENST00000287263 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
RAB11FIP1-201ENST00000287263 KRTAP5-9P26371 169 aa3.09□□□□□ -1.92
RAB11FIP1-201ENST00000287263 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
RAB11FIP1-201ENST00000287263 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
RAB11FIP1-201ENST00000287263 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
RAB11FIP1-201ENST00000287263 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
RAB11FIP1-201ENST00000287263 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
RAB11FIP1-201ENST00000287263 MUC5ACP98088 5654 aa2.55□□□□□ -2
RAB11FIP1-201ENST00000287263 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
RAB11FIP1-201ENST00000287263 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
RAB11FIP1-201ENST00000287263 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
RAB11FIP1-201ENST00000287263 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
RAB11FIP1-201ENST00000287263 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
RAB11FIP1-201ENST00000287263 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
RAB11FIP1-201ENST00000287263 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
RAB11FIP1-201ENST00000287263 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
RAB11FIP1-201ENST00000287263 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
RAB11FIP1-201ENST00000287263 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
RAB11FIP1-201ENST00000287263 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
RAB11FIP1-201ENST00000287263 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
RAB11FIP1-201ENST00000287263 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
RAB11FIP1-201ENST00000287263 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.16
RAB11FIP1-201ENST00000287263 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
RAB11FIP1-201ENST00000287263 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms