RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 MT1MQ8N339 61 aa6.15□□□□□ -1.43
LSM11-201ENST00000286307 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
LSM11-201ENST00000286307 EPPK1P58107 5090 aaKnown RBP6.12□□□□□ -1.43
LSM11-201ENST00000286307 LCE3EQ5T5B0 92 aa6.08□□□□□ -1.44
LSM11-201ENST00000286307 KRTAP4-3Q9BYR4 195 aa6.05□□□□□ -1.44
LSM11-201ENST00000286307 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
LSM11-201ENST00000286307 MT3P25713 68 aa6.01□□□□□ -1.45
LSM11-201ENST00000286307 LCE1BQ5T7P3 118 aa5.96□□□□□ -1.45
LSM11-201ENST00000286307 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
LSM11-201ENST00000286307 ABCA13Q86UQ4 5058 aa5.93□□□□□ -1.46
LSM11-201ENST00000286307 FSIP2Q5CZC0 6907 aa5.93□□□□□ -1.46
LSM11-201ENST00000286307 FAT4Q6V0I7 4981 aa5.86□□□□□ -1.47
LSM11-201ENST00000286307 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.84□□□□□ -1.47
LSM11-201ENST00000286307 KRTAP6-3Q3LI67 103 aa5.83□□□□□ -1.48
LSM11-201ENST00000286307 KRTAP2-3P0C7H8 128 aa5.79□□□□□ -1.48
LSM11-201ENST00000286307 KRTAP2-4Q9BYR9 128 aa5.79□□□□□ -1.48
LSM11-201ENST00000286307 RNF213Q63HN8 5207 aa5.7□□□□□ -1.5
LSM11-201ENST00000286307 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
LSM11-201ENST00000286307 KRTAP19-7Q3SYF9 63 aa5.69□□□□□ -1.5
LSM11-201ENST00000286307 HMCN2Q8NDA2 5059 aa5.69□□□□□ -1.5
LSM11-201ENST00000286307 UBR4Q5T4S7 5183 aa5.68□□□□□ -1.5
LSM11-201ENST00000286307 SYNE2Q8WXH0 6885 aaKnown RBP5.67□□□□□ -1.5
LSM11-201ENST00000286307 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
LSM11-201ENST00000286307 MT1AP04731 61 aa5.61□□□□□ -1.51
LSM11-201ENST00000286307 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
LSM11-201ENST00000286307 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
LSM11-201ENST00000286307 KRTAP2-1Q9BYU5 128 aa5.57□□□□□ -1.52
LSM11-201ENST00000286307 PRM1P04553 51 aa5.53□□□□□ -1.52
LSM11-201ENST00000286307 MUC2Q02817 5179 aa5.5□□□□□ -1.53
LSM11-201ENST00000286307 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
LSM11-201ENST00000286307 KRTAP6-2Q3LI66 62 aa5.37□□□□□ -1.55
LSM11-201ENST00000286307 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
LSM11-201ENST00000286307 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
LSM11-201ENST00000286307 LCE1CQ5T751 118 aa5.2□□□□□ -1.58
LSM11-201ENST00000286307 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
LSM11-201ENST00000286307 LCE1FQ5T754 118 aa5.2□□□□□ -1.58
LSM11-201ENST00000286307 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
LSM11-201ENST00000286307 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
LSM11-201ENST00000286307 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
LSM11-201ENST00000286307 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
LSM11-201ENST00000286307 MACF1Q9UPN3 7388 aaKnown RBP4.78□□□□□ -1.64
LSM11-201ENST00000286307 KRTAP5-9P26371 169 aa4.77□□□□□ -1.65
LSM11-201ENST00000286307 NEBP20929 6669 aa4.73□□□□□ -1.65
LSM11-201ENST00000286307 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
LSM11-201ENST00000286307 USH2AO75445 5202 aa4.64□□□□□ -1.67
LSM11-201ENST00000286307 KMT2DO14686 5537 aa4.61□□□□□ -1.67
LSM11-201ENST00000286307 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
LSM11-201ENST00000286307 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
LSM11-201ENST00000286307 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
LSM11-201ENST00000286307 SSPOA2VEC9 5147 aa4.54□□□□□ -1.68
LSM11-201ENST00000286307 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
LSM11-201ENST00000286307 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
LSM11-201ENST00000286307 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
LSM11-201ENST00000286307 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
LSM11-201ENST00000286307 MUC12Q9UKN1 5478 aa4.16□□□□□ -1.74
LSM11-201ENST00000286307 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
LSM11-201ENST00000286307 MDN1Q9NU22 5596 aa4.02□□□□□ -1.77
LSM11-201ENST00000286307 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
LSM11-201ENST00000286307 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
LSM11-201ENST00000286307 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
LSM11-201ENST00000286307 MUC19Q7Z5P9 8384 aa3.63□□□□□ -1.83
LSM11-201ENST00000286307 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
LSM11-201ENST00000286307 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
LSM11-201ENST00000286307 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
LSM11-201ENST00000286307 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
LSM11-201ENST00000286307 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
LSM11-201ENST00000286307 AHNAK2Q8IVF2 5795 aa3.13□□□□□ -1.91
LSM11-201ENST00000286307 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
LSM11-201ENST00000286307 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
LSM11-201ENST00000286307 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
LSM11-201ENST00000286307 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
LSM11-201ENST00000286307 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
LSM11-201ENST00000286307 KRTAP5-7Q6L8G8 165 aa2.65□□□□□ -1.98
LSM11-201ENST00000286307 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
LSM11-201ENST00000286307 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.04
LSM11-201ENST00000286307 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
LSM11-201ENST00000286307 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 80.4 ms