RNA–Protein interactions for RNA: ENST00000285681.6

USP25-202, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-202ENST00000285681 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
USP25-202ENST00000285681 SYNE1Q8NF91 8797 aaKnown RBP6.37□□□□□ -1.39
USP25-202ENST00000285681 LCE2AQ5TA79 106 aaPredicted RBP6.36□□□□□ -1.39
USP25-202ENST00000285681 RNF213Q63HN8 5207 aa6.31□□□□□ -1.4
USP25-202ENST00000285681 MT4P47944 62 aa6.3□□□□□ -1.4
USP25-202ENST00000285681 MT3P25713 68 aa6.3□□□□□ -1.4
USP25-202ENST00000285681 FAT4Q6V0I7 4981 aa6.29□□□□□ -1.4
USP25-202ENST00000285681 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
USP25-202ENST00000285681 KRTAP9-6A0A140TA67 174 aa6.19□□□□□ -1.42
USP25-202ENST00000285681 KRTAP4-3Q9BYR4 195 aa6.19□□□□□ -1.42
USP25-202ENST00000285681 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
USP25-202ENST00000285681 KRTAP19-7Q3SYF9 63 aa6.12□□□□□ -1.43
USP25-202ENST00000285681 HMCN2Q8NDA2 5059 aa6.06□□□□□ -1.44
USP25-202ENST00000285681 MUC2Q02817 5179 aa6.03□□□□□ -1.44
USP25-202ENST00000285681 MT1AP04731 61 aa5.97□□□□□ -1.45
USP25-202ENST00000285681 LCE1BQ5T7P3 118 aa5.97□□□□□ -1.45
USP25-202ENST00000285681 LCE1DQ5T752 114 aa5.96□□□□□ -1.45
USP25-202ENST00000285681 PRM1P04553 51 aa5.89□□□□□ -1.47
USP25-202ENST00000285681 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
USP25-202ENST00000285681 KRTAP20-1Q3LI63 56 aa5.85□□□□□ -1.47
USP25-202ENST00000285681 SYNE2Q8WXH0 6885 aaKnown RBP5.83□□□□□ -1.48
USP25-202ENST00000285681 LCE1AQ5T7P2 110 aa5.83□□□□□ -1.48
USP25-202ENST00000285681 KRTAP6-3Q3LI67 103 aa5.82□□□□□ -1.48
USP25-202ENST00000285681 KRTAP2-3P0C7H8 128 aa5.79□□□□□ -1.48
USP25-202ENST00000285681 KRTAP2-4Q9BYR9 128 aa5.79□□□□□ -1.48
USP25-202ENST00000285681 KRTAP2-1Q9BYU5 128 aa5.79□□□□□ -1.48
USP25-202ENST00000285681 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
USP25-202ENST00000285681 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
USP25-202ENST00000285681 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.66□□□□□ -1.5
USP25-202ENST00000285681 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
USP25-202ENST00000285681 KRTAP6-1Q3LI64 71 aa5.57□□□□□ -1.52
USP25-202ENST00000285681 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
USP25-202ENST00000285681 KRTAP6-2Q3LI66 62 aa5.52□□□□□ -1.53
USP25-202ENST00000285681 KRTAP2-2Q9BYT5 123 aa5.5□□□□□ -1.53
USP25-202ENST00000285681 KRTAP9-4Q9BYQ2 154 aa5.49□□□□□ -1.53
USP25-202ENST00000285681 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
USP25-202ENST00000285681 USH2AO75445 5202 aa5.35□□□□□ -1.55
USP25-202ENST00000285681 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
USP25-202ENST00000285681 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
USP25-202ENST00000285681 LCE1CQ5T751 118 aa5.07□□□□□ -1.6
USP25-202ENST00000285681 LCE1EQ5T753 118 aa5.07□□□□□ -1.6
USP25-202ENST00000285681 LCE1FQ5T754 118 aa5.07□□□□□ -1.6
USP25-202ENST00000285681 MACF1Q9UPN3 7388 aaKnown RBP5.06□□□□□ -1.6
USP25-202ENST00000285681 KMT2DO14686 5537 aa5□□□□□ -1.61
USP25-202ENST00000285681 KRTAP5-9P26371 169 aa4.95□□□□□ -1.62
USP25-202ENST00000285681 NEBP20929 6669 aa4.93□□□□□ -1.62
USP25-202ENST00000285681 KRTAP9-9Q9BYP9 154 aa4.81□□□□□ -1.64
USP25-202ENST00000285681 SSPOA2VEC9 5147 aa4.81□□□□□ -1.64
USP25-202ENST00000285681 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
USP25-202ENST00000285681 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
USP25-202ENST00000285681 MUC12Q9UKN1 5478 aa4.67□□□□□ -1.66
USP25-202ENST00000285681 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.67
USP25-202ENST00000285681 MUC19Q7Z5P9 8384 aa4.57□□□□□ -1.68
USP25-202ENST00000285681 GPR98Q8WXG9 6306 aa4.55□□□□□ -1.68
USP25-202ENST00000285681 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
USP25-202ENST00000285681 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
USP25-202ENST00000285681 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
USP25-202ENST00000285681 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
USP25-202ENST00000285681 KRTAP4-4Q9BYR3 166 aa4.13□□□□□ -1.75
USP25-202ENST00000285681 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
USP25-202ENST00000285681 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
USP25-202ENST00000285681 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
USP25-202ENST00000285681 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
USP25-202ENST00000285681 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
USP25-202ENST00000285681 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
USP25-202ENST00000285681 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
USP25-202ENST00000285681 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
USP25-202ENST00000285681 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
USP25-202ENST00000285681 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
USP25-202ENST00000285681 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
USP25-202ENST00000285681 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
USP25-202ENST00000285681 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
USP25-202ENST00000285681 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.96
USP25-202ENST00000285681 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.98
USP25-202ENST00000285681 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
USP25-202ENST00000285681 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
USP25-202ENST00000285681 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms