RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 KRTAP19-6Q3LI70 58 aa3.16□□□□□ -1.9
LAMA3-201ENST00000269217 MT3P25713 68 aa3.13□□□□□ -1.91
LAMA3-201ENST00000269217 LCE2DQ5TA82 110 aaPredicted RBP3.13□□□□□ -1.91
LAMA3-201ENST00000269217 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
LAMA3-201ENST00000269217 MUC2Q02817 5179 aa3.12□□□□□ -1.91
LAMA3-201ENST00000269217 LOC100996750A0A140TA64 210 aa3.1□□□□□ -1.91
LAMA3-201ENST00000269217 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
LAMA3-201ENST00000269217 PRM1P04553 51 aa3.07□□□□□ -1.92
LAMA3-201ENST00000269217 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
LAMA3-201ENST00000269217 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
LAMA3-201ENST00000269217 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
LAMA3-201ENST00000269217 MT4P47944 62 aa3.01□□□□□ -1.93
LAMA3-201ENST00000269217 MT1AP04731 61 aa2.99□□□□□ -1.93
LAMA3-201ENST00000269217 LCE2AQ5TA79 106 aaPredicted RBP2.99□□□□□ -1.93
LAMA3-201ENST00000269217 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
LAMA3-201ENST00000269217 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
LAMA3-201ENST00000269217 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
LAMA3-201ENST00000269217 HMCN2Q8NDA2 5059 aa2.98□□□□□ -1.93
LAMA3-201ENST00000269217 KRTAP9-2Q9BYQ4 174 aa2.96□□□□□ -1.94
LAMA3-201ENST00000269217 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
LAMA3-201ENST00000269217 LCE1DQ5T752 114 aa2.92□□□□□ -1.94
LAMA3-201ENST00000269217 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
LAMA3-201ENST00000269217 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
LAMA3-201ENST00000269217 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
LAMA3-201ENST00000269217 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
LAMA3-201ENST00000269217 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
LAMA3-201ENST00000269217 USH2AO75445 5202 aa2.78□□□□□ -1.97
LAMA3-201ENST00000269217 KRTAP9-6A0A140TA67 174 aa2.76□□□□□ -1.97
LAMA3-201ENST00000269217 LCE5AQ5TCM9 118 aa2.76□□□□□ -1.97
LAMA3-201ENST00000269217 FCGBPQ9Y6R7 5405 aaPredicted RBP2.76□□□□□ -1.97
LAMA3-201ENST00000269217 KRTAP9-4Q9BYQ2 154 aa2.75□□□□□ -1.97
LAMA3-201ENST00000269217 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
LAMA3-201ENST00000269217 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.97
LAMA3-201ENST00000269217 KRTAP20-1Q3LI63 56 aa2.69□□□□□ -1.98
LAMA3-201ENST00000269217 SYNE2Q8WXH0 6885 aaKnown RBP2.67□□□□□ -1.98
LAMA3-201ENST00000269217 LCE4AQ5TA78 99 aa2.66□□□□□ -1.98
LAMA3-201ENST00000269217 KRTAP9-7A8MTY7 169 aa2.64□□□□□ -1.99
LAMA3-201ENST00000269217 KMT2DO14686 5537 aa2.63□□□□□ -1.99
LAMA3-201ENST00000269217 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.58□□□□□ -2
LAMA3-201ENST00000269217 KRTAP2-2Q9BYT5 123 aa2.55□□□□□ -2
LAMA3-201ENST00000269217 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
LAMA3-201ENST00000269217 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
LAMA3-201ENST00000269217 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
LAMA3-201ENST00000269217 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
LAMA3-201ENST00000269217 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
LAMA3-201ENST00000269217 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
LAMA3-201ENST00000269217 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
LAMA3-201ENST00000269217 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
LAMA3-201ENST00000269217 KRTAP9-9Q9BYP9 154 aa2.27□□□□□ -2.05
LAMA3-201ENST00000269217 KRTAP4-11Q9BYQ6 195 aa2.25□□□□□ -2.05
LAMA3-201ENST00000269217 KRTAP4-6Q9BYQ5 205 aa2.24□□□□□ -2.05
LAMA3-201ENST00000269217 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
LAMA3-201ENST00000269217 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
LAMA3-201ENST00000269217 NEBP20929 6669 aa2.17□□□□□ -2.06
LAMA3-201ENST00000269217 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
LAMA3-201ENST00000269217 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
LAMA3-201ENST00000269217 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
LAMA3-201ENST00000269217 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
LAMA3-201ENST00000269217 KRTAP4-12Q9BQ66 201 aa1.98□□□□□ -2.09
LAMA3-201ENST00000269217 KRTAP4-2Q9BYR5 136 aa1.98□□□□□ -2.09
LAMA3-201ENST00000269217 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
LAMA3-201ENST00000269217 HMCN1Q96RW7 5635 aa1.87□□□□□ -2.11
LAMA3-201ENST00000269217 KRTAP5-3Q6L8H2 238 aa1.81□□□□□ -2.12
LAMA3-201ENST00000269217 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
LAMA3-201ENST00000269217 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
LAMA3-201ENST00000269217 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.15
LAMA3-201ENST00000269217 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
LAMA3-201ENST00000269217 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
LAMA3-201ENST00000269217 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
LAMA3-201ENST00000269217 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
LAMA3-201ENST00000269217 KRTAP5-1Q6L8H4 278 aa1.48□□□□□ -2.17
LAMA3-201ENST00000269217 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
LAMA3-201ENST00000269217 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
LAMA3-201ENST00000269217 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
LAMA3-201ENST00000269217 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.19
LAMA3-201ENST00000269217 KRTAP5-7Q6L8G8 165 aa1.14□□□□□ -2.23
LAMA3-201ENST00000269217 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 74.5 ms