RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
CPT1A-201ENST00000265641 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
CPT1A-201ENST00000265641 PCLOQ9Y6V0 5065 aa3.43□□□□□ -1.86
CPT1A-201ENST00000265641 KRTAP9-2Q9BYQ4 174 aa3.42□□□□□ -1.86
CPT1A-201ENST00000265641 KRTAP4-7Q9BYR0 210 aa3.4□□□□□ -1.86
CPT1A-201ENST00000265641 MT1EP04732 61 aa3.39□□□□□ -1.87
CPT1A-201ENST00000265641 PRM1P04553 51 aa3.37□□□□□ -1.87
CPT1A-201ENST00000265641 LCE1AQ5T7P2 110 aa3.37□□□□□ -1.87
CPT1A-201ENST00000265641 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.37□□□□□ -1.87
CPT1A-201ENST00000265641 HMCN2Q8NDA2 5059 aa3.35□□□□□ -1.87
CPT1A-201ENST00000265641 LOC100996750A0A140TA64 210 aa3.35□□□□□ -1.87
CPT1A-201ENST00000265641 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
CPT1A-201ENST00000265641 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
CPT1A-201ENST00000265641 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
CPT1A-201ENST00000265641 SPRR2EP22531 72 aa3.29□□□□□ -1.88
CPT1A-201ENST00000265641 SPRR2BP35325 72 aa3.29□□□□□ -1.88
CPT1A-201ENST00000265641 SPRR2AP35326 72 aa3.29□□□□□ -1.88
CPT1A-201ENST00000265641 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
CPT1A-201ENST00000265641 RNF213Q63HN8 5207 aa3.29□□□□□ -1.88
CPT1A-201ENST00000265641 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
CPT1A-201ENST00000265641 FAT4Q6V0I7 4981 aa3.26□□□□□ -1.89
CPT1A-201ENST00000265641 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
CPT1A-201ENST00000265641 FSIP2Q5CZC0 6907 aa3.21□□□□□ -1.9
CPT1A-201ENST00000265641 SPRR2DP22532 72 aa3.21□□□□□ -1.9
CPT1A-201ENST00000265641 MT1AP04731 61 aa3.2□□□□□ -1.9
CPT1A-201ENST00000265641 MUC2Q02817 5179 aa3.2□□□□□ -1.9
CPT1A-201ENST00000265641 MT1MQ8N339 61 aa3.19□□□□□ -1.9
CPT1A-201ENST00000265641 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
CPT1A-201ENST00000265641 UBR4Q5T4S7 5183 aa3.17□□□□□ -1.9
CPT1A-201ENST00000265641 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
CPT1A-201ENST00000265641 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
CPT1A-201ENST00000265641 KRTAP4-9Q9BYQ8 210 aa3.01□□□□□ -1.93
CPT1A-201ENST00000265641 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
CPT1A-201ENST00000265641 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
CPT1A-201ENST00000265641 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
CPT1A-201ENST00000265641 KRTAP20-1Q3LI63 56 aa2.86□□□□□ -1.95
CPT1A-201ENST00000265641 KRTAP6-3Q3LI67 103 aa2.85□□□□□ -1.95
CPT1A-201ENST00000265641 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
CPT1A-201ENST00000265641 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
CPT1A-201ENST00000265641 USH2AO75445 5202 aa2.79□□□□□ -1.96
CPT1A-201ENST00000265641 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
CPT1A-201ENST00000265641 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
CPT1A-201ENST00000265641 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
CPT1A-201ENST00000265641 KMT2DO14686 5537 aa2.75□□□□□ -1.97
CPT1A-201ENST00000265641 MT4P47944 62 aa2.73□□□□□ -1.97
CPT1A-201ENST00000265641 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
CPT1A-201ENST00000265641 KRTAP5-9P26371 169 aa2.65□□□□□ -1.99
CPT1A-201ENST00000265641 DSTQ03001 7570 aaKnown RBP2.64□□□□□ -1.99
CPT1A-201ENST00000265641 SSPOA2VEC9 5147 aa2.6□□□□□ -1.99
CPT1A-201ENST00000265641 MACF1Q9UPN3 7388 aaKnown RBP2.52□□□□□ -2.01
CPT1A-201ENST00000265641 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
CPT1A-201ENST00000265641 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
CPT1A-201ENST00000265641 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
CPT1A-201ENST00000265641 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
CPT1A-201ENST00000265641 NEBP20929 6669 aa2.32□□□□□ -2.04
CPT1A-201ENST00000265641 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
CPT1A-201ENST00000265641 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
CPT1A-201ENST00000265641 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
CPT1A-201ENST00000265641 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
CPT1A-201ENST00000265641 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
CPT1A-201ENST00000265641 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
CPT1A-201ENST00000265641 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
CPT1A-201ENST00000265641 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
CPT1A-201ENST00000265641 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
CPT1A-201ENST00000265641 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
CPT1A-201ENST00000265641 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
CPT1A-201ENST00000265641 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
CPT1A-201ENST00000265641 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
CPT1A-201ENST00000265641 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
CPT1A-201ENST00000265641 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
CPT1A-201ENST00000265641 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
CPT1A-201ENST00000265641 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
CPT1A-201ENST00000265641 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
CPT1A-201ENST00000265641 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
CPT1A-201ENST00000265641 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
CPT1A-201ENST00000265641 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
CPT1A-201ENST00000265641 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms