RNA–Protein interactions for RNA: ENST00000265362.8

SEMA3A-201, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3A, Length 8,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-201ENST00000265362 LCE3DQ9BYE3 92 aa1.86□□□□□ -2.11
SEMA3A-201ENST00000265362 FAT4Q6V0I7 4981 aa1.85□□□□□ -2.11
SEMA3A-201ENST00000265362 KRTAP2-3P0C7H8 128 aa1.84□□□□□ -2.12
SEMA3A-201ENST00000265362 KRTAP2-4Q9BYR9 128 aa1.84□□□□□ -2.12
SEMA3A-201ENST00000265362 KRTAP2-1Q9BYU5 128 aa1.84□□□□□ -2.12
SEMA3A-201ENST00000265362 KRTAP9-2Q9BYQ4 174 aa1.84□□□□□ -2.12
SEMA3A-201ENST00000265362 LCE3EQ5T5B0 92 aa1.83□□□□□ -2.12
SEMA3A-201ENST00000265362 LCE1AQ5T7P2 110 aa1.83□□□□□ -2.12
SEMA3A-201ENST00000265362 MT3P25713 68 aa1.83□□□□□ -2.12
SEMA3A-201ENST00000265362 RNF213Q63HN8 5207 aa1.82□□□□□ -2.12
SEMA3A-201ENST00000265362 KRTAP4-7Q9BYR0 210 aa1.81□□□□□ -2.12
SEMA3A-201ENST00000265362 UBR4Q5T4S7 5183 aa1.79□□□□□ -2.12
SEMA3A-201ENST00000265362 LCE5AQ5TCM9 118 aa1.78□□□□□ -2.12
SEMA3A-201ENST00000265362 MT1AP04731 61 aa1.76□□□□□ -2.13
SEMA3A-201ENST00000265362 KRTAP9-6A8MVA2 160 aa1.72□□□□□ -2.13
SEMA3A-201ENST00000265362 KRTAP6-3Q3LI67 103 aa1.72□□□□□ -2.13
SEMA3A-201ENST00000265362 LOC100996750A0A140TA64 210 aa1.71□□□□□ -2.14
SEMA3A-201ENST00000265362 KRTAP4-3Q9BYR4 195 aa1.71□□□□□ -2.14
SEMA3A-201ENST00000265362 FSIP2Q5CZC0 6907 aa1.7□□□□□ -2.14
SEMA3A-201ENST00000265362 KRTAP9-6A0A140TA67 174 aa1.68□□□□□ -2.14
SEMA3A-201ENST00000265362 SYNE1Q8NF91 8797 aaKnown RBP1.66□□□□□ -2.14
SEMA3A-201ENST00000265362 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.14
SEMA3A-201ENST00000265362 KRTAP5-9P26371 169 aa1.65□□□□□ -2.15
SEMA3A-201ENST00000265362 LCE4AQ5TA78 99 aa1.64□□□□□ -2.15
SEMA3A-201ENST00000265362 SYNE2Q8WXH0 6885 aaKnown RBP1.63□□□□□ -2.15
SEMA3A-201ENST00000265362 KRTAP9-4Q9BYQ2 154 aa1.63□□□□□ -2.15
SEMA3A-201ENST00000265362 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.62□□□□□ -2.15
SEMA3A-201ENST00000265362 KRTAP6-1Q3LI64 71 aa1.62□□□□□ -2.15
SEMA3A-201ENST00000265362 PRM1P04553 51 aa1.61□□□□□ -2.15
SEMA3A-201ENST00000265362 MT4P47944 62 aa1.6□□□□□ -2.15
SEMA3A-201ENST00000265362 KRTAP9-7A8MTY7 169 aa1.6□□□□□ -2.15
SEMA3A-201ENST00000265362 KMT2DO14686 5537 aa1.59□□□□□ -2.15
SEMA3A-201ENST00000265362 KRTAP6-2Q3LI66 62 aa1.56□□□□□ -2.16
SEMA3A-201ENST00000265362 DSTQ03001 7570 aaKnown RBP1.56□□□□□ -2.16
SEMA3A-201ENST00000265362 KRTAP2-2Q9BYT5 123 aa1.55□□□□□ -2.16
SEMA3A-201ENST00000265362 KRTAP20-1Q3LI63 56 aa1.55□□□□□ -2.16
SEMA3A-201ENST00000265362 FCGBPQ9Y6R7 5405 aaPredicted RBP1.53□□□□□ -2.16
SEMA3A-201ENST00000265362 USH2AO75445 5202 aa1.53□□□□□ -2.16
SEMA3A-201ENST00000265362 KRTAP4-9Q9BYQ8 210 aa1.53□□□□□ -2.16
SEMA3A-201ENST00000265362 LCE1DQ5T752 114 aa1.52□□□□□ -2.17
SEMA3A-201ENST00000265362 SSPOA2VEC9 5147 aa1.5□□□□□ -2.17
SEMA3A-201ENST00000265362 LCE1BQ5T7P3 118 aa1.48□□□□□ -2.17
SEMA3A-201ENST00000265362 MUC12Q9UKN1 5478 aa1.46□□□□□ -2.18
SEMA3A-201ENST00000265362 MACF1Q9UPN3 7388 aaKnown RBP1.45□□□□□ -2.18
SEMA3A-201ENST00000265362 KRTAP5-2Q701N4 177 aa1.44□□□□□ -2.18
SEMA3A-201ENST00000265362 OBSCNQ5VST9 7968 aa1.44□□□□□ -2.18
SEMA3A-201ENST00000265362 KRTAP5-5Q701N2 237 aaPredicted RBP1.43□□□□□ -2.18
SEMA3A-201ENST00000265362 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
SEMA3A-201ENST00000265362 MDN1Q9NU22 5596 aa1.37□□□□□ -2.19
SEMA3A-201ENST00000265362 KRTAP5-4Q6L8H1 288 aa1.36□□□□□ -2.19
SEMA3A-201ENST00000265362 LCE1EQ5T753 118 aa1.35□□□□□ -2.19
SEMA3A-201ENST00000265362 KRTAP4-6Q9BYQ5 205 aa1.34□□□□□ -2.19
SEMA3A-201ENST00000265362 NEBP20929 6669 aa1.32□□□□□ -2.2
SEMA3A-201ENST00000265362 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
SEMA3A-201ENST00000265362 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
SEMA3A-201ENST00000265362 KRTAP9-9Q9BYP9 154 aa1.29□□□□□ -2.2
SEMA3A-201ENST00000265362 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
SEMA3A-201ENST00000265362 AHNAK2Q8IVF2 5795 aa1.24□□□□□ -2.21
SEMA3A-201ENST00000265362 KRTAP4-11Q9BYQ6 195 aa1.24□□□□□ -2.21
SEMA3A-201ENST00000265362 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.23□□□□□ -2.21
SEMA3A-201ENST00000265362 LCE1CQ5T751 118 aa1.21□□□□□ -2.22
SEMA3A-201ENST00000265362 LCE1FQ5T754 118 aa1.19□□□□□ -2.22
SEMA3A-201ENST00000265362 KRTAP5-3Q6L8H2 238 aa1.18□□□□□ -2.22
SEMA3A-201ENST00000265362 MUC19Q7Z5P9 8384 aa1.1□□□□□ -2.23
SEMA3A-201ENST00000265362 KRTAP5-10Q6L8G5 202 aa1.08□□□□□ -2.24
SEMA3A-201ENST00000265362 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
SEMA3A-201ENST00000265362 KRTAP5-8O75690 187 aa1.06□□□□□ -2.24
SEMA3A-201ENST00000265362 KRTAP4-2Q9BYR5 136 aa1.04□□□□□ -2.24
SEMA3A-201ENST00000265362 KRTAP5-11Q6L8G4 156 aa1.03□□□□□ -2.24
SEMA3A-201ENST00000265362 KRTAP5-1Q6L8H4 278 aa1.01□□□□□ -2.25
SEMA3A-201ENST00000265362 KRTAP4-4Q9BYR3 166 aa1□□□□□ -2.25
SEMA3A-201ENST00000265362 KRTAP4-12Q9BQ66 201 aa0.98□□□□□ -2.25
SEMA3A-201ENST00000265362 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.26
SEMA3A-201ENST00000265362 KRTAP5-7Q6L8G8 165 aa0.96□□□□□ -2.26
SEMA3A-201ENST00000265362 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
SEMA3A-201ENST00000265362 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
SEMA3A-201ENST00000265362 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 88.4 ms