RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 KRTAP9-2Q9BYQ4 174 aa4.43□□□□□ -1.7
NID1-201ENST00000264187 HSPG2P98160 4391 aa4.42□□□□□ -1.7
NID1-201ENST00000264187 PKHD1L1Q86WI1 4243 aa4.36□□□□□ -1.71
NID1-201ENST00000264187 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
NID1-201ENST00000264187 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
NID1-201ENST00000264187 FSIP2Q5CZC0 6907 aa4.3□□□□□ -1.72
NID1-201ENST00000264187 KRTAP19-2Q3LHN2 52 aa4.28□□□□□ -1.72
NID1-201ENST00000264187 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
NID1-201ENST00000264187 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
NID1-201ENST00000264187 MT1AP04731 61 aa4.25□□□□□ -1.73
NID1-201ENST00000264187 KRTAP2-3P0C7H8 128 aa4.25□□□□□ -1.73
NID1-201ENST00000264187 KRTAP2-4Q9BYR9 128 aa4.25□□□□□ -1.73
NID1-201ENST00000264187 KRTAP2-1Q9BYU5 128 aa4.25□□□□□ -1.73
NID1-201ENST00000264187 BIRC6Q9NR09 4857 aa4.23□□□□□ -1.73
NID1-201ENST00000264187 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
NID1-201ENST00000264187 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
NID1-201ENST00000264187 ABCA13Q86UQ4 5058 aa4.17□□□□□ -1.74
NID1-201ENST00000264187 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
NID1-201ENST00000264187 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
NID1-201ENST00000264187 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
NID1-201ENST00000264187 LCE1AQ5T7P2 110 aa4.14□□□□□ -1.75
NID1-201ENST00000264187 TNXBP22105 4242 aa4.14□□□□□ -1.75
NID1-201ENST00000264187 FLGP20930 4061 aaPredicted RBP4.14□□□□□ -1.75
NID1-201ENST00000264187 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
NID1-201ENST00000264187 MUC17Q685J3 4493 aa4.12□□□□□ -1.75
NID1-201ENST00000264187 MUC2Q02817 5179 aa4.09□□□□□ -1.75
NID1-201ENST00000264187 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
NID1-201ENST00000264187 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
NID1-201ENST00000264187 UBR4Q5T4S7 5183 aa4.04□□□□□ -1.76
NID1-201ENST00000264187 RNF213Q63HN8 5207 aa3.94□□□□□ -1.78
NID1-201ENST00000264187 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
NID1-201ENST00000264187 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
NID1-201ENST00000264187 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
NID1-201ENST00000264187 FAT4Q6V0I7 4981 aa3.87□□□□□ -1.79
NID1-201ENST00000264187 LCE2AQ5TA79 106 aaPredicted RBP3.84□□□□□ -1.8
NID1-201ENST00000264187 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
NID1-201ENST00000264187 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
NID1-201ENST00000264187 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
NID1-201ENST00000264187 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.75□□□□□ -1.81
NID1-201ENST00000264187 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
NID1-201ENST00000264187 FCGBPQ9Y6R7 5405 aaPredicted RBP3.67□□□□□ -1.82
NID1-201ENST00000264187 MACF1Q9UPN3 7388 aaKnown RBP3.67□□□□□ -1.82
NID1-201ENST00000264187 USH2AO75445 5202 aa3.59□□□□□ -1.83
NID1-201ENST00000264187 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
NID1-201ENST00000264187 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
NID1-201ENST00000264187 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
NID1-201ENST00000264187 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
NID1-201ENST00000264187 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
NID1-201ENST00000264187 KMT2DO14686 5537 aa3.32□□□□□ -1.88
NID1-201ENST00000264187 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
NID1-201ENST00000264187 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
NID1-201ENST00000264187 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
NID1-201ENST00000264187 NEBP20929 6669 aa3.25□□□□□ -1.89
NID1-201ENST00000264187 SSPOA2VEC9 5147 aa3.2□□□□□ -1.9
NID1-201ENST00000264187 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
NID1-201ENST00000264187 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
NID1-201ENST00000264187 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
NID1-201ENST00000264187 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
NID1-201ENST00000264187 KRTAP5-9P26371 169 aa2.93□□□□□ -1.94
NID1-201ENST00000264187 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
NID1-201ENST00000264187 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
NID1-201ENST00000264187 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
NID1-201ENST00000264187 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
NID1-201ENST00000264187 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
NID1-201ENST00000264187 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
NID1-201ENST00000264187 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
NID1-201ENST00000264187 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
NID1-201ENST00000264187 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
NID1-201ENST00000264187 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
NID1-201ENST00000264187 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
NID1-201ENST00000264187 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
NID1-201ENST00000264187 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
NID1-201ENST00000264187 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
NID1-201ENST00000264187 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
NID1-201ENST00000264187 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
NID1-201ENST00000264187 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
NID1-201ENST00000264187 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 10.4 ms