RNA–Protein interactions for RNA: ENST00000263519.4

ATP2B3-201, Transcript of ATPase plasma membrane Ca2+ transporting 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2B3, Length 6,420 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3-201ENST00000263519 KRTAP19-6Q3LI70 58 aa4.03□□□□□ -1.76
ATP2B3-201ENST00000263519 LRP2P98164 4655 aa4.03□□□□□ -1.76
ATP2B3-201ENST00000263519 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
ATP2B3-201ENST00000263519 MT1AP04731 61 aa3.96□□□□□ -1.78
ATP2B3-201ENST00000263519 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
ATP2B3-201ENST00000263519 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
ATP2B3-201ENST00000263519 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
ATP2B3-201ENST00000263519 KMT2CQ8NEZ4 4911 aaKnown RBP3.93□□□□□ -1.78
ATP2B3-201ENST00000263519 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
ATP2B3-201ENST00000263519 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
ATP2B3-201ENST00000263519 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
ATP2B3-201ENST00000263519 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
ATP2B3-201ENST00000263519 KIAA1109Q2LD37 5005 aa3.77□□□□□ -1.81
ATP2B3-201ENST00000263519 BIRC6Q9NR09 4857 aa3.76□□□□□ -1.81
ATP2B3-201ENST00000263519 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
ATP2B3-201ENST00000263519 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
ATP2B3-201ENST00000263519 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
ATP2B3-201ENST00000263519 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
ATP2B3-201ENST00000263519 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
ATP2B3-201ENST00000263519 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
ATP2B3-201ENST00000263519 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
ATP2B3-201ENST00000263519 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
ATP2B3-201ENST00000263519 PCLOQ9Y6V0 5065 aa3.71□□□□□ -1.82
ATP2B3-201ENST00000263519 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.82
ATP2B3-201ENST00000263519 LCE2AQ5TA79 106 aaPredicted RBP3.61□□□□□ -1.83
ATP2B3-201ENST00000263519 HMCN2Q8NDA2 5059 aa3.59□□□□□ -1.84
ATP2B3-201ENST00000263519 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
ATP2B3-201ENST00000263519 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
ATP2B3-201ENST00000263519 FAT4Q6V0I7 4981 aa3.41□□□□□ -1.86
ATP2B3-201ENST00000263519 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
ATP2B3-201ENST00000263519 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
ATP2B3-201ENST00000263519 ABCA13Q86UQ4 5058 aa3.35□□□□□ -1.87
ATP2B3-201ENST00000263519 EPPK1P58107 5090 aaKnown RBP3.31□□□□□ -1.88
ATP2B3-201ENST00000263519 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
ATP2B3-201ENST00000263519 RNF213Q63HN8 5207 aa3.3□□□□□ -1.88
ATP2B3-201ENST00000263519 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
ATP2B3-201ENST00000263519 FSIP2Q5CZC0 6907 aa3.22□□□□□ -1.89
ATP2B3-201ENST00000263519 MUC2Q02817 5179 aa3.17□□□□□ -1.9
ATP2B3-201ENST00000263519 UBR4Q5T4S7 5183 aa3.13□□□□□ -1.91
ATP2B3-201ENST00000263519 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
ATP2B3-201ENST00000263519 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
ATP2B3-201ENST00000263519 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
ATP2B3-201ENST00000263519 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
ATP2B3-201ENST00000263519 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
ATP2B3-201ENST00000263519 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
ATP2B3-201ENST00000263519 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
ATP2B3-201ENST00000263519 KMT2DO14686 5537 aa2.91□□□□□ -1.94
ATP2B3-201ENST00000263519 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
ATP2B3-201ENST00000263519 NEBP20929 6669 aa2.79□□□□□ -1.96
ATP2B3-201ENST00000263519 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.97
ATP2B3-201ENST00000263519 SSPOA2VEC9 5147 aa2.75□□□□□ -1.97
ATP2B3-201ENST00000263519 USH2AO75445 5202 aa2.71□□□□□ -1.98
ATP2B3-201ENST00000263519 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
ATP2B3-201ENST00000263519 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
ATP2B3-201ENST00000263519 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
ATP2B3-201ENST00000263519 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
ATP2B3-201ENST00000263519 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
ATP2B3-201ENST00000263519 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
ATP2B3-201ENST00000263519 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
ATP2B3-201ENST00000263519 MDN1Q9NU22 5596 aa2.28□□□□□ -2.04
ATP2B3-201ENST00000263519 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
ATP2B3-201ENST00000263519 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
ATP2B3-201ENST00000263519 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
ATP2B3-201ENST00000263519 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
ATP2B3-201ENST00000263519 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
ATP2B3-201ENST00000263519 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
ATP2B3-201ENST00000263519 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
ATP2B3-201ENST00000263519 HMCN1Q96RW7 5635 aa1.87□□□□□ -2.11
ATP2B3-201ENST00000263519 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
ATP2B3-201ENST00000263519 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
ATP2B3-201ENST00000263519 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
ATP2B3-201ENST00000263519 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
ATP2B3-201ENST00000263519 AHNAK2Q8IVF2 5795 aa1.65□□□□□ -2.15
ATP2B3-201ENST00000263519 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
ATP2B3-201ENST00000263519 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
ATP2B3-201ENST00000263519 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
ATP2B3-201ENST00000263519 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 170 ms