RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
CROCCP3-201ENST00000263511 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.58
CROCCP3-201ENST00000263511 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
CROCCP3-201ENST00000263511 LCE2AQ5TA79 106 aaPredicted RBP5.09□□□□□ -1.59
CROCCP3-201ENST00000263511 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
CROCCP3-201ENST00000263511 TNXBP22105 4242 aa5.05□□□□□ -1.6
CROCCP3-201ENST00000263511 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
CROCCP3-201ENST00000263511 LCE1BQ5T7P3 118 aa5.02□□□□□ -1.61
CROCCP3-201ENST00000263511 UBR4Q5T4S7 5183 aa5.01□□□□□ -1.61
CROCCP3-201ENST00000263511 RNF213Q63HN8 5207 aa5□□□□□ -1.61
CROCCP3-201ENST00000263511 LCE1DQ5T752 114 aa5□□□□□ -1.61
CROCCP3-201ENST00000263511 PRM1P04553 51 aa4.99□□□□□ -1.61
CROCCP3-201ENST00000263511 KRTAP19-7Q3SYF9 63 aa4.99□□□□□ -1.61
CROCCP3-201ENST00000263511 MT1AP04731 61 aa4.96□□□□□ -1.62
CROCCP3-201ENST00000263511 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
CROCCP3-201ENST00000263511 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
CROCCP3-201ENST00000263511 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
CROCCP3-201ENST00000263511 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
CROCCP3-201ENST00000263511 KRTAP2-1Q9BYU5 128 aa4.86□□□□□ -1.63
CROCCP3-201ENST00000263511 KRTAP20-1Q3LI63 56 aa4.84□□□□□ -1.63
CROCCP3-201ENST00000263511 HMCN2Q8NDA2 5059 aa4.8□□□□□ -1.64
CROCCP3-201ENST00000263511 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
CROCCP3-201ENST00000263511 MUC2Q02817 5179 aa4.8□□□□□ -1.64
CROCCP3-201ENST00000263511 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
CROCCP3-201ENST00000263511 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
CROCCP3-201ENST00000263511 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
CROCCP3-201ENST00000263511 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
CROCCP3-201ENST00000263511 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.65
CROCCP3-201ENST00000263511 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
CROCCP3-201ENST00000263511 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
CROCCP3-201ENST00000263511 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.68
CROCCP3-201ENST00000263511 LCE4AQ5TA78 99 aa4.59□□□□□ -1.68
CROCCP3-201ENST00000263511 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.59□□□□□ -1.68
CROCCP3-201ENST00000263511 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
CROCCP3-201ENST00000263511 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
CROCCP3-201ENST00000263511 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
CROCCP3-201ENST00000263511 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
CROCCP3-201ENST00000263511 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
CROCCP3-201ENST00000263511 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
CROCCP3-201ENST00000263511 USH2AO75445 5202 aa4.25□□□□□ -1.73
CROCCP3-201ENST00000263511 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.74
CROCCP3-201ENST00000263511 DSTQ03001 7570 aaKnown RBP4.12□□□□□ -1.75
CROCCP3-201ENST00000263511 MACF1Q9UPN3 7388 aaKnown RBP4.04□□□□□ -1.76
CROCCP3-201ENST00000263511 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
CROCCP3-201ENST00000263511 NEBP20929 6669 aa3.99□□□□□ -1.77
CROCCP3-201ENST00000263511 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
CROCCP3-201ENST00000263511 KMT2DO14686 5537 aa3.96□□□□□ -1.78
CROCCP3-201ENST00000263511 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
CROCCP3-201ENST00000263511 SSPOA2VEC9 5147 aa3.8□□□□□ -1.8
CROCCP3-201ENST00000263511 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
CROCCP3-201ENST00000263511 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
CROCCP3-201ENST00000263511 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
CROCCP3-201ENST00000263511 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
CROCCP3-201ENST00000263511 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
CROCCP3-201ENST00000263511 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
CROCCP3-201ENST00000263511 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
CROCCP3-201ENST00000263511 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
CROCCP3-201ENST00000263511 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
CROCCP3-201ENST00000263511 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
CROCCP3-201ENST00000263511 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
CROCCP3-201ENST00000263511 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
CROCCP3-201ENST00000263511 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
CROCCP3-201ENST00000263511 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
CROCCP3-201ENST00000263511 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
CROCCP3-201ENST00000263511 KRTAP5-8O75690 187 aa2.84□□□□□ -1.96
CROCCP3-201ENST00000263511 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
CROCCP3-201ENST00000263511 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
CROCCP3-201ENST00000263511 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
CROCCP3-201ENST00000263511 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
CROCCP3-201ENST00000263511 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
CROCCP3-201ENST00000263511 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
CROCCP3-201ENST00000263511 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
CROCCP3-201ENST00000263511 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
CROCCP3-201ENST00000263511 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
CROCCP3-201ENST00000263511 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
CROCCP3-201ENST00000263511 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
CROCCP3-201ENST00000263511 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 77.1 ms