RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
CCDC6-201ENST00000263102 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
CCDC6-201ENST00000263102 HERC2O95714 4834 aa4.43□□□□□ -1.7
CCDC6-201ENST00000263102 KMT2CQ8NEZ4 4911 aaKnown RBP4.42□□□□□ -1.7
CCDC6-201ENST00000263102 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
CCDC6-201ENST00000263102 LPAP08519 4548 aa4.41□□□□□ -1.7
CCDC6-201ENST00000263102 RYR2Q92736 4967 aa4.38□□□□□ -1.71
CCDC6-201ENST00000263102 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
CCDC6-201ENST00000263102 PCLOQ9Y6V0 5065 aa4.35□□□□□ -1.71
CCDC6-201ENST00000263102 BIRC6Q9NR09 4857 aa4.34□□□□□ -1.71
CCDC6-201ENST00000263102 EPPK1P58107 5090 aaKnown RBP4.27□□□□□ -1.73
CCDC6-201ENST00000263102 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
CCDC6-201ENST00000263102 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
CCDC6-201ENST00000263102 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
CCDC6-201ENST00000263102 MT1AP04731 61 aa4.22□□□□□ -1.73
CCDC6-201ENST00000263102 MUC2Q02817 5179 aa4.17□□□□□ -1.74
CCDC6-201ENST00000263102 MUC17Q685J3 4493 aa4.15□□□□□ -1.75
CCDC6-201ENST00000263102 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
CCDC6-201ENST00000263102 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
CCDC6-201ENST00000263102 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
CCDC6-201ENST00000263102 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
CCDC6-201ENST00000263102 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
CCDC6-201ENST00000263102 KRTAP19-2Q3LHN2 52 aa4.11□□□□□ -1.75
CCDC6-201ENST00000263102 KRTAP6-3Q3LI67 103 aa4.11□□□□□ -1.75
CCDC6-201ENST00000263102 UBR4Q5T4S7 5183 aa4.1□□□□□ -1.75
CCDC6-201ENST00000263102 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.07□□□□□ -1.76
CCDC6-201ENST00000263102 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
CCDC6-201ENST00000263102 RNF213Q63HN8 5207 aa4.06□□□□□ -1.76
CCDC6-201ENST00000263102 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
CCDC6-201ENST00000263102 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
CCDC6-201ENST00000263102 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
CCDC6-201ENST00000263102 TNXBP22105 4242 aa4□□□□□ -1.77
CCDC6-201ENST00000263102 KRTAP6-1Q3LI64 71 aa3.98□□□□□ -1.77
CCDC6-201ENST00000263102 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
CCDC6-201ENST00000263102 FLGP20930 4061 aaPredicted RBP3.97□□□□□ -1.77
CCDC6-201ENST00000263102 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
CCDC6-201ENST00000263102 LCE2AQ5TA79 106 aaPredicted RBP3.95□□□□□ -1.78
CCDC6-201ENST00000263102 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
CCDC6-201ENST00000263102 HMCN2Q8NDA2 5059 aa3.85□□□□□ -1.79
CCDC6-201ENST00000263102 DSTQ03001 7570 aaKnown RBP3.76□□□□□ -1.81
CCDC6-201ENST00000263102 FCGBPQ9Y6R7 5405 aaPredicted RBP3.75□□□□□ -1.81
CCDC6-201ENST00000263102 USH2AO75445 5202 aa3.68□□□□□ -1.82
CCDC6-201ENST00000263102 KMT2DO14686 5537 aa3.66□□□□□ -1.82
CCDC6-201ENST00000263102 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
CCDC6-201ENST00000263102 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
CCDC6-201ENST00000263102 KRTAP4-11Q9BYQ6 195 aa3.46□□□□□ -1.86
CCDC6-201ENST00000263102 KRTAP4-6Q9BYQ5 205 aa3.44□□□□□ -1.86
CCDC6-201ENST00000263102 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
CCDC6-201ENST00000263102 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
CCDC6-201ENST00000263102 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
CCDC6-201ENST00000263102 NEBP20929 6669 aa3.4□□□□□ -1.86
CCDC6-201ENST00000263102 MUC12Q9UKN1 5478 aa3.33□□□□□ -1.88
CCDC6-201ENST00000263102 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
CCDC6-201ENST00000263102 SSPOA2VEC9 5147 aa3.15□□□□□ -1.91
CCDC6-201ENST00000263102 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
CCDC6-201ENST00000263102 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
CCDC6-201ENST00000263102 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
CCDC6-201ENST00000263102 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
CCDC6-201ENST00000263102 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
CCDC6-201ENST00000263102 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
CCDC6-201ENST00000263102 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
CCDC6-201ENST00000263102 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
CCDC6-201ENST00000263102 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
CCDC6-201ENST00000263102 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
CCDC6-201ENST00000263102 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
CCDC6-201ENST00000263102 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
CCDC6-201ENST00000263102 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
CCDC6-201ENST00000263102 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
CCDC6-201ENST00000263102 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
CCDC6-201ENST00000263102 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
CCDC6-201ENST00000263102 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
CCDC6-201ENST00000263102 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
CCDC6-201ENST00000263102 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
CCDC6-201ENST00000263102 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
CCDC6-201ENST00000263102 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
CCDC6-201ENST00000263102 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
CCDC6-201ENST00000263102 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 80.6 ms