RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
TTC39A-202ENST00000262676 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
TTC39A-202ENST00000262676 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
TTC39A-202ENST00000262676 LCE2AQ5TA79 106 aaPredicted RBP4.06□□□□□ -1.76
TTC39A-202ENST00000262676 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
TTC39A-202ENST00000262676 MT3P25713 68 aa4.03□□□□□ -1.76
TTC39A-202ENST00000262676 MT1EP04732 61 aa4.03□□□□□ -1.76
TTC39A-202ENST00000262676 MT1LQ93083 61 aa4.02□□□□□ -1.77
TTC39A-202ENST00000262676 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
TTC39A-202ENST00000262676 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
TTC39A-202ENST00000262676 FLGP20930 4061 aaPredicted RBP4□□□□□ -1.77
TTC39A-202ENST00000262676 FAT4Q6V0I7 4981 aa3.99□□□□□ -1.77
TTC39A-202ENST00000262676 LOC100996750A0A140TA64 210 aa3.99□□□□□ -1.77
TTC39A-202ENST00000262676 MT1MQ8N339 61 aa3.95□□□□□ -1.78
TTC39A-202ENST00000262676 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
TTC39A-202ENST00000262676 MUC2Q02817 5179 aa3.93□□□□□ -1.78
TTC39A-202ENST00000262676 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.93□□□□□ -1.78
TTC39A-202ENST00000262676 MUC17Q685J3 4493 aa3.9□□□□□ -1.78
TTC39A-202ENST00000262676 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.79
TTC39A-202ENST00000262676 RNF213Q63HN8 5207 aa3.89□□□□□ -1.79
TTC39A-202ENST00000262676 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
TTC39A-202ENST00000262676 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
TTC39A-202ENST00000262676 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
TTC39A-202ENST00000262676 HMCN2Q8NDA2 5059 aa3.78□□□□□ -1.8
TTC39A-202ENST00000262676 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
TTC39A-202ENST00000262676 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
TTC39A-202ENST00000262676 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
TTC39A-202ENST00000262676 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
TTC39A-202ENST00000262676 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
TTC39A-202ENST00000262676 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
TTC39A-202ENST00000262676 KRTAP2-1Q9BYU5 128 aa3.68□□□□□ -1.82
TTC39A-202ENST00000262676 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.83
TTC39A-202ENST00000262676 MT1AP04731 61 aa3.57□□□□□ -1.84
TTC39A-202ENST00000262676 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
TTC39A-202ENST00000262676 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
TTC39A-202ENST00000262676 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
TTC39A-202ENST00000262676 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
TTC39A-202ENST00000262676 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
TTC39A-202ENST00000262676 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
TTC39A-202ENST00000262676 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.87
TTC39A-202ENST00000262676 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
TTC39A-202ENST00000262676 USH2AO75445 5202 aa3.31□□□□□ -1.88
TTC39A-202ENST00000262676 NEBP20929 6669 aa3.29□□□□□ -1.88
TTC39A-202ENST00000262676 KMT2DO14686 5537 aa3.29□□□□□ -1.88
TTC39A-202ENST00000262676 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
TTC39A-202ENST00000262676 FCGBPQ9Y6R7 5405 aaPredicted RBP3.29□□□□□ -1.88
TTC39A-202ENST00000262676 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
TTC39A-202ENST00000262676 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
TTC39A-202ENST00000262676 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
TTC39A-202ENST00000262676 SSPOA2VEC9 5147 aa3.06□□□□□ -1.92
TTC39A-202ENST00000262676 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
TTC39A-202ENST00000262676 MUC12Q9UKN1 5478 aa2.98□□□□□ -1.93
TTC39A-202ENST00000262676 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
TTC39A-202ENST00000262676 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
TTC39A-202ENST00000262676 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
TTC39A-202ENST00000262676 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
TTC39A-202ENST00000262676 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.96
TTC39A-202ENST00000262676 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
TTC39A-202ENST00000262676 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
TTC39A-202ENST00000262676 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -1.99
TTC39A-202ENST00000262676 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
TTC39A-202ENST00000262676 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
TTC39A-202ENST00000262676 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
TTC39A-202ENST00000262676 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
TTC39A-202ENST00000262676 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
TTC39A-202ENST00000262676 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
TTC39A-202ENST00000262676 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
TTC39A-202ENST00000262676 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
TTC39A-202ENST00000262676 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
TTC39A-202ENST00000262676 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
TTC39A-202ENST00000262676 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
TTC39A-202ENST00000262676 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
TTC39A-202ENST00000262676 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
TTC39A-202ENST00000262676 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
TTC39A-202ENST00000262676 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
TTC39A-202ENST00000262676 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
TTC39A-202ENST00000262676 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 124.9 ms