RNA–Protein interactions for RNA: ENST00000262227.7

ARHGAP28-201, Transcript of Rho GTPase activating protein 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGAP28, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-201ENST00000262227 MT1MQ8N339 61 aa2.3□□□□□ -2.04
ARHGAP28-201ENST00000262227 TNXBP22105 4242 aa2.3□□□□□ -2.04
ARHGAP28-201ENST00000262227 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
ARHGAP28-201ENST00000262227 MUC2Q02817 5179 aa2.28□□□□□ -2.04
ARHGAP28-201ENST00000262227 KRTAP9-7A8MTY7 169 aa2.27□□□□□ -2.05
ARHGAP28-201ENST00000262227 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
ARHGAP28-201ENST00000262227 KRTAP2-3P0C7H8 128 aa2.26□□□□□ -2.05
ARHGAP28-201ENST00000262227 KRTAP2-4Q9BYR9 128 aa2.26□□□□□ -2.05
ARHGAP28-201ENST00000262227 FLGP20930 4061 aaPredicted RBP2.25□□□□□ -2.05
ARHGAP28-201ENST00000262227 RNF213Q63HN8 5207 aa2.21□□□□□ -2.06
ARHGAP28-201ENST00000262227 MT4P47944 62 aa2.2□□□□□ -2.06
ARHGAP28-201ENST00000262227 LCE4AQ5TA78 99 aa2.2□□□□□ -2.06
ARHGAP28-201ENST00000262227 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.18□□□□□ -2.06
ARHGAP28-201ENST00000262227 MT1AP04731 61 aa2.18□□□□□ -2.06
ARHGAP28-201ENST00000262227 FAT4Q6V0I7 4981 aa2.17□□□□□ -2.06
ARHGAP28-201ENST00000262227 KRTAP2-2Q9BYT5 123 aa2.16□□□□□ -2.06
ARHGAP28-201ENST00000262227 KRTAP2-1Q9BYU5 128 aa2.16□□□□□ -2.06
ARHGAP28-201ENST00000262227 UBR4Q5T4S7 5183 aa2.14□□□□□ -2.07
ARHGAP28-201ENST00000262227 KRTAP19-7Q3SYF9 63 aa2.13□□□□□ -2.07
ARHGAP28-201ENST00000262227 KRTAP4-7Q9BYR0 210 aa2.1□□□□□ -2.07
ARHGAP28-201ENST00000262227 HMCN2Q8NDA2 5059 aa2.09□□□□□ -2.08
ARHGAP28-201ENST00000262227 LCE5AQ5TCM9 118 aa2.06□□□□□ -2.08
ARHGAP28-201ENST00000262227 LCE1DQ5T752 114 aa2.04□□□□□ -2.08
ARHGAP28-201ENST00000262227 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.09
ARHGAP28-201ENST00000262227 KRTAP9-4Q9BYQ2 154 aa2.01□□□□□ -2.09
ARHGAP28-201ENST00000262227 KRTAP4-3Q9BYR4 195 aa2.01□□□□□ -2.09
ARHGAP28-201ENST00000262227 LOC100996750A0A140TA64 210 aa2□□□□□ -2.09
ARHGAP28-201ENST00000262227 PRM1P04553 51 aa1.98□□□□□ -2.09
ARHGAP28-201ENST00000262227 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
ARHGAP28-201ENST00000262227 KRTAP5-9P26371 169 aa1.95□□□□□ -2.1
ARHGAP28-201ENST00000262227 USH2AO75445 5202 aa1.94□□□□□ -2.1
ARHGAP28-201ENST00000262227 FSIP2Q5CZC0 6907 aa1.91□□□□□ -2.1
ARHGAP28-201ENST00000262227 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
ARHGAP28-201ENST00000262227 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
ARHGAP28-201ENST00000262227 SYNE2Q8WXH0 6885 aaKnown RBP1.9□□□□□ -2.11
ARHGAP28-201ENST00000262227 KRTAP4-9Q9BYQ8 210 aa1.88□□□□□ -2.11
ARHGAP28-201ENST00000262227 KRTAP4-6Q9BYQ5 205 aa1.88□□□□□ -2.11
ARHGAP28-201ENST00000262227 KRTAP9-9Q9BYP9 154 aa1.86□□□□□ -2.11
ARHGAP28-201ENST00000262227 KMT2DO14686 5537 aa1.84□□□□□ -2.12
ARHGAP28-201ENST00000262227 NEBP20929 6669 aa1.79□□□□□ -2.12
ARHGAP28-201ENST00000262227 MACF1Q9UPN3 7388 aaKnown RBP1.79□□□□□ -2.12
ARHGAP28-201ENST00000262227 SSPOA2VEC9 5147 aa1.78□□□□□ -2.12
ARHGAP28-201ENST00000262227 KRTAP9-6A8MVA2 160 aa1.77□□□□□ -2.13
ARHGAP28-201ENST00000262227 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
ARHGAP28-201ENST00000262227 LCE1EQ5T753 118 aa1.77□□□□□ -2.13
ARHGAP28-201ENST00000262227 LCE1FQ5T754 118 aa1.77□□□□□ -2.13
ARHGAP28-201ENST00000262227 KRTAP5-4Q6L8H1 288 aa1.73□□□□□ -2.13
ARHGAP28-201ENST00000262227 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
ARHGAP28-201ENST00000262227 KRTAP4-12Q9BQ66 201 aa1.71□□□□□ -2.14
ARHGAP28-201ENST00000262227 OBSCNQ5VST9 7968 aa1.69□□□□□ -2.14
ARHGAP28-201ENST00000262227 DSTQ03001 7570 aaKnown RBP1.68□□□□□ -2.14
ARHGAP28-201ENST00000262227 MUC12Q9UKN1 5478 aa1.66□□□□□ -2.14
ARHGAP28-201ENST00000262227 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
ARHGAP28-201ENST00000262227 SYNE1Q8NF91 8797 aaKnown RBP1.62□□□□□ -2.15
ARHGAP28-201ENST00000262227 KRTAP4-11Q9BYQ6 195 aa1.58□□□□□ -2.16
ARHGAP28-201ENST00000262227 MDN1Q9NU22 5596 aa1.54□□□□□ -2.16
ARHGAP28-201ENST00000262227 KRTAP5-5Q701N2 237 aaPredicted RBP1.52□□□□□ -2.17
ARHGAP28-201ENST00000262227 KRTAP5-3Q6L8H2 238 aa1.5□□□□□ -2.17
ARHGAP28-201ENST00000262227 KRTAP4-2Q9BYR5 136 aa1.47□□□□□ -2.17
ARHGAP28-201ENST00000262227 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
ARHGAP28-201ENST00000262227 MUC5ACP98088 5654 aa1.35□□□□□ -2.19
ARHGAP28-201ENST00000262227 HMCN1Q96RW7 5635 aa1.33□□□□□ -2.2
ARHGAP28-201ENST00000262227 KRTAP5-2Q701N4 177 aa1.33□□□□□ -2.2
ARHGAP28-201ENST00000262227 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.29□□□□□ -2.2
ARHGAP28-201ENST00000262227 KRTAP5-8O75690 187 aa1.29□□□□□ -2.2
ARHGAP28-201ENST00000262227 KRTAP4-4Q9BYR3 166 aa1.28□□□□□ -2.2
ARHGAP28-201ENST00000262227 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
ARHGAP28-201ENST00000262227 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
ARHGAP28-201ENST00000262227 KRTAP5-11Q6L8G4 156 aa1.2□□□□□ -2.22
ARHGAP28-201ENST00000262227 MUC5BQ9HC84 5762 aaPredicted RBP1.18□□□□□ -2.22
ARHGAP28-201ENST00000262227 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
ARHGAP28-201ENST00000262227 KRTAP5-7Q6L8G8 165 aa1.17□□□□□ -2.22
ARHGAP28-201ENST00000262227 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
ARHGAP28-201ENST00000262227 KRTAP5-1Q6L8H4 278 aa1.11□□□□□ -2.23
ARHGAP28-201ENST00000262227 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
ARHGAP28-201ENST00000262227 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
ARHGAP28-201ENST00000262227 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 114.1 ms