RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
ARFGEF1-201ENST00000262215 PCLOQ9Y6V0 5065 aa3.64□□□□□ -1.83
ARFGEF1-201ENST00000262215 SYNE2Q8WXH0 6885 aaKnown RBP3.64□□□□□ -1.83
ARFGEF1-201ENST00000262215 MUC17Q685J3 4493 aa3.57□□□□□ -1.84
ARFGEF1-201ENST00000262215 KRTAP19-2Q3LHN2 52 aa3.56□□□□□ -1.84
ARFGEF1-201ENST00000262215 EPPK1P58107 5090 aaKnown RBP3.55□□□□□ -1.84
ARFGEF1-201ENST00000262215 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
ARFGEF1-201ENST00000262215 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
ARFGEF1-201ENST00000262215 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
ARFGEF1-201ENST00000262215 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
ARFGEF1-201ENST00000262215 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
ARFGEF1-201ENST00000262215 KRTAP9-2Q9BYQ4 174 aa3.54□□□□□ -1.84
ARFGEF1-201ENST00000262215 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
ARFGEF1-201ENST00000262215 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
ARFGEF1-201ENST00000262215 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
ARFGEF1-201ENST00000262215 ABCA13Q86UQ4 5058 aa3.52□□□□□ -1.85
ARFGEF1-201ENST00000262215 BIRC6Q9NR09 4857 aa3.5□□□□□ -1.85
ARFGEF1-201ENST00000262215 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
ARFGEF1-201ENST00000262215 UBR4Q5T4S7 5183 aa3.47□□□□□ -1.85
ARFGEF1-201ENST00000262215 MT1AP04731 61 aa3.44□□□□□ -1.86
ARFGEF1-201ENST00000262215 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
ARFGEF1-201ENST00000262215 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
ARFGEF1-201ENST00000262215 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
ARFGEF1-201ENST00000262215 FLGP20930 4061 aaPredicted RBP3.4□□□□□ -1.86
ARFGEF1-201ENST00000262215 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
ARFGEF1-201ENST00000262215 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
ARFGEF1-201ENST00000262215 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
ARFGEF1-201ENST00000262215 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
ARFGEF1-201ENST00000262215 HMCN2Q8NDA2 5059 aa3.33□□□□□ -1.88
ARFGEF1-201ENST00000262215 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
ARFGEF1-201ENST00000262215 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
ARFGEF1-201ENST00000262215 MUC2Q02817 5179 aa3.3□□□□□ -1.88
ARFGEF1-201ENST00000262215 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
ARFGEF1-201ENST00000262215 RNF213Q63HN8 5207 aa3.27□□□□□ -1.89
ARFGEF1-201ENST00000262215 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
ARFGEF1-201ENST00000262215 FCGBPQ9Y6R7 5405 aaPredicted RBP3.16□□□□□ -1.9
ARFGEF1-201ENST00000262215 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
ARFGEF1-201ENST00000262215 USH2AO75445 5202 aa3.08□□□□□ -1.92
ARFGEF1-201ENST00000262215 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
ARFGEF1-201ENST00000262215 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
ARFGEF1-201ENST00000262215 LCE2AQ5TA79 106 aaPredicted RBP3.01□□□□□ -1.93
ARFGEF1-201ENST00000262215 KRTAP6-3Q3LI67 103 aa2.99□□□□□ -1.93
ARFGEF1-201ENST00000262215 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.94
ARFGEF1-201ENST00000262215 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
ARFGEF1-201ENST00000262215 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
ARFGEF1-201ENST00000262215 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
ARFGEF1-201ENST00000262215 KMT2DO14686 5537 aa2.92□□□□□ -1.94
ARFGEF1-201ENST00000262215 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
ARFGEF1-201ENST00000262215 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
ARFGEF1-201ENST00000262215 SSPOA2VEC9 5147 aa2.81□□□□□ -1.96
ARFGEF1-201ENST00000262215 KRTAP4-6Q9BYQ5 205 aa2.79□□□□□ -1.96
ARFGEF1-201ENST00000262215 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
ARFGEF1-201ENST00000262215 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
ARFGEF1-201ENST00000262215 MUC12Q9UKN1 5478 aa2.61□□□□□ -1.99
ARFGEF1-201ENST00000262215 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
ARFGEF1-201ENST00000262215 NEBP20929 6669 aa2.55□□□□□ -2
ARFGEF1-201ENST00000262215 MDN1Q9NU22 5596 aa2.44□□□□□ -2.02
ARFGEF1-201ENST00000262215 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
ARFGEF1-201ENST00000262215 KRTAP5-9P26371 169 aa2.27□□□□□ -2.05
ARFGEF1-201ENST00000262215 KRTAP5-4Q6L8H1 288 aa2.19□□□□□ -2.06
ARFGEF1-201ENST00000262215 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
ARFGEF1-201ENST00000262215 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
ARFGEF1-201ENST00000262215 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
ARFGEF1-201ENST00000262215 KRTAP5-3Q6L8H2 238 aa1.96□□□□□ -2.1
ARFGEF1-201ENST00000262215 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
ARFGEF1-201ENST00000262215 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
ARFGEF1-201ENST00000262215 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
ARFGEF1-201ENST00000262215 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
ARFGEF1-201ENST00000262215 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
ARFGEF1-201ENST00000262215 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
ARFGEF1-201ENST00000262215 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
ARFGEF1-201ENST00000262215 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
ARFGEF1-201ENST00000262215 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
ARFGEF1-201ENST00000262215 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
ARFGEF1-201ENST00000262215 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
ARFGEF1-201ENST00000262215 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
ARFGEF1-201ENST00000262215 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 42.8 ms