RNA–Protein interactions for RNA: ENST00000261900.7

CCNT1-201, Transcript of cyclin T1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNT1, Length 6,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-201ENST00000261900 KRTAP2-3P0C7H8 128 aa2.62□□□□□ -1.99
CCNT1-201ENST00000261900 KRTAP2-4Q9BYR9 128 aa2.62□□□□□ -1.99
CCNT1-201ENST00000261900 SYNE2Q8WXH0 6885 aaKnown RBP2.6□□□□□ -1.99
CCNT1-201ENST00000261900 LRP2P98164 4655 aa2.58□□□□□ -2
CCNT1-201ENST00000261900 VPS13BQ7Z7G8 4022 aa2.58□□□□□ -2
CCNT1-201ENST00000261900 KRTAP4-7Q9BYR0 210 aa2.57□□□□□ -2
CCNT1-201ENST00000261900 UBR4Q5T4S7 5183 aa2.57□□□□□ -2
CCNT1-201ENST00000261900 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
CCNT1-201ENST00000261900 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
CCNT1-201ENST00000261900 RNF213Q63HN8 5207 aa2.55□□□□□ -2
CCNT1-201ENST00000261900 HMCN2Q8NDA2 5059 aa2.54□□□□□ -2
CCNT1-201ENST00000261900 MACF1Q9UPN3 7388 aaKnown RBP2.53□□□□□ -2.01
CCNT1-201ENST00000261900 LCE1AQ5T7P2 110 aa2.52□□□□□ -2.01
CCNT1-201ENST00000261900 KRTAP2-2Q9BYT5 123 aa2.52□□□□□ -2.01
CCNT1-201ENST00000261900 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
CCNT1-201ENST00000261900 PKHD1L1Q86WI1 4243 aa2.51□□□□□ -2.01
CCNT1-201ENST00000261900 KRTAP19-2Q3LHN2 52 aa2.5□□□□□ -2.01
CCNT1-201ENST00000261900 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
CCNT1-201ENST00000261900 MT1AP04731 61 aa2.5□□□□□ -2.01
CCNT1-201ENST00000261900 FSIP2Q5CZC0 6907 aa2.49□□□□□ -2.01
CCNT1-201ENST00000261900 LCE2AQ5TA79 106 aaPredicted RBP2.49□□□□□ -2.01
CCNT1-201ENST00000261900 LCE4AQ5TA78 99 aa2.48□□□□□ -2.01
CCNT1-201ENST00000261900 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.48□□□□□ -2.01
CCNT1-201ENST00000261900 MUC2Q02817 5179 aa2.47□□□□□ -2.01
CCNT1-201ENST00000261900 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
CCNT1-201ENST00000261900 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
CCNT1-201ENST00000261900 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
CCNT1-201ENST00000261900 PRM1P04553 51 aa2.45□□□□□ -2.02
CCNT1-201ENST00000261900 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
CCNT1-201ENST00000261900 MUC17Q685J3 4493 aa2.43□□□□□ -2.02
CCNT1-201ENST00000261900 LOC100996750A0A140TA64 210 aa2.43□□□□□ -2.02
CCNT1-201ENST00000261900 KRTAP4-9Q9BYQ8 210 aa2.41□□□□□ -2.02
CCNT1-201ENST00000261900 FAT4Q6V0I7 4981 aa2.41□□□□□ -2.02
CCNT1-201ENST00000261900 TNXBP22105 4242 aa2.39□□□□□ -2.03
CCNT1-201ENST00000261900 LPAP08519 4548 aa2.38□□□□□ -2.03
CCNT1-201ENST00000261900 KRTAP19-7Q3SYF9 63 aa2.34□□□□□ -2.04
CCNT1-201ENST00000261900 KRTAP9-9Q9BYP9 154 aa2.32□□□□□ -2.04
CCNT1-201ENST00000261900 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
CCNT1-201ENST00000261900 KRTAP9-4Q9BYQ2 154 aa2.26□□□□□ -2.05
CCNT1-201ENST00000261900 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
CCNT1-201ENST00000261900 FLGP20930 4061 aaPredicted RBP2.24□□□□□ -2.05
CCNT1-201ENST00000261900 NEBP20929 6669 aa2.21□□□□□ -2.06
CCNT1-201ENST00000261900 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.06
CCNT1-201ENST00000261900 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
CCNT1-201ENST00000261900 USH2AO75445 5202 aa2.15□□□□□ -2.07
CCNT1-201ENST00000261900 KMT2DO14686 5537 aa2.13□□□□□ -2.07
CCNT1-201ENST00000261900 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
CCNT1-201ENST00000261900 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
CCNT1-201ENST00000261900 FCGBPQ9Y6R7 5405 aaPredicted RBP2.01□□□□□ -2.09
CCNT1-201ENST00000261900 SSPOA2VEC9 5147 aa2□□□□□ -2.09
CCNT1-201ENST00000261900 KRTAP5-9P26371 169 aa1.95□□□□□ -2.1
CCNT1-201ENST00000261900 KRTAP9-6A8MVA2 160 aa1.93□□□□□ -2.1
CCNT1-201ENST00000261900 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
CCNT1-201ENST00000261900 KRTAP4-6Q9BYQ5 205 aa1.91□□□□□ -2.1
CCNT1-201ENST00000261900 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
CCNT1-201ENST00000261900 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.12
CCNT1-201ENST00000261900 KRTAP4-2Q9BYR5 136 aa1.84□□□□□ -2.12
CCNT1-201ENST00000261900 KRTAP4-11Q9BYQ6 195 aa1.82□□□□□ -2.12
CCNT1-201ENST00000261900 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.12
CCNT1-201ENST00000261900 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
CCNT1-201ENST00000261900 KRTAP5-3Q6L8H2 238 aa1.68□□□□□ -2.14
CCNT1-201ENST00000261900 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
CCNT1-201ENST00000261900 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
CCNT1-201ENST00000261900 KRTAP5-5Q701N2 237 aaPredicted RBP1.6□□□□□ -2.15
CCNT1-201ENST00000261900 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
CCNT1-201ENST00000261900 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
CCNT1-201ENST00000261900 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
CCNT1-201ENST00000261900 MUC5BQ9HC84 5762 aaPredicted RBP1.45□□□□□ -2.18
CCNT1-201ENST00000261900 KRTAP5-2Q701N4 177 aa1.33□□□□□ -2.2
CCNT1-201ENST00000261900 KRTAP5-11Q6L8G4 156 aa1.22□□□□□ -2.21
CCNT1-201ENST00000261900 KRTAP5-10Q6L8G5 202 aa1.19□□□□□ -2.22
CCNT1-201ENST00000261900 KRTAP5-1Q6L8H4 278 aa1.13□□□□□ -2.23
CCNT1-201ENST00000261900 KRTAP5-7Q6L8G8 165 aa1.1□□□□□ -2.23
CCNT1-201ENST00000261900 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
CCNT1-201ENST00000261900 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.07□□□□□ -2.24
CCNT1-201ENST00000261900 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.25
CCNT1-201ENST00000261900 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 69.6 ms