RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 LPAP08519 4548 aa3.36□□□□□ -1.87
SLC6A4-201ENST00000261707 KRTAP9-3Q9BYQ3 159 aa3.32□□□□□ -1.88
SLC6A4-201ENST00000261707 HERC2O95714 4834 aa3.31□□□□□ -1.88
SLC6A4-201ENST00000261707 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
SLC6A4-201ENST00000261707 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
SLC6A4-201ENST00000261707 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SLC6A4-201ENST00000261707 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
SLC6A4-201ENST00000261707 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
SLC6A4-201ENST00000261707 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
SLC6A4-201ENST00000261707 MT1EP04732 61 aa3.28□□□□□ -1.88
SLC6A4-201ENST00000261707 HERC1Q15751 4861 aa3.25□□□□□ -1.89
SLC6A4-201ENST00000261707 LOC100996750A0A140TA64 210 aa3.24□□□□□ -1.89
SLC6A4-201ENST00000261707 MT1MQ8N339 61 aa3.18□□□□□ -1.9
SLC6A4-201ENST00000261707 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
SLC6A4-201ENST00000261707 KRTAP4-9Q9BYQ8 210 aa3.15□□□□□ -1.9
SLC6A4-201ENST00000261707 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
SLC6A4-201ENST00000261707 MUC2Q02817 5179 aa3.12□□□□□ -1.91
SLC6A4-201ENST00000261707 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
SLC6A4-201ENST00000261707 MUC17Q685J3 4493 aa3.12□□□□□ -1.91
SLC6A4-201ENST00000261707 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
SLC6A4-201ENST00000261707 KRTAP19-2Q3LHN2 52 aa3.11□□□□□ -1.91
SLC6A4-201ENST00000261707 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
SLC6A4-201ENST00000261707 USH2AO75445 5202 aa3.1□□□□□ -1.91
SLC6A4-201ENST00000261707 RNF213Q63HN8 5207 aa3.08□□□□□ -1.92
SLC6A4-201ENST00000261707 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.07□□□□□ -1.92
SLC6A4-201ENST00000261707 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
SLC6A4-201ENST00000261707 FLGP20930 4061 aaPredicted RBP3.05□□□□□ -1.92
SLC6A4-201ENST00000261707 HMCN2Q8NDA2 5059 aa3.04□□□□□ -1.92
SLC6A4-201ENST00000261707 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
SLC6A4-201ENST00000261707 MT1AP04731 61 aa3.01□□□□□ -1.93
SLC6A4-201ENST00000261707 FAT4Q6V0I7 4981 aa3□□□□□ -1.93
SLC6A4-201ENST00000261707 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
SLC6A4-201ENST00000261707 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
SLC6A4-201ENST00000261707 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.93
SLC6A4-201ENST00000261707 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
SLC6A4-201ENST00000261707 LCE2AQ5TA79 106 aaPredicted RBP2.89□□□□□ -1.95
SLC6A4-201ENST00000261707 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
SLC6A4-201ENST00000261707 KRTAP9-4Q9BYQ2 154 aa2.78□□□□□ -1.96
SLC6A4-201ENST00000261707 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
SLC6A4-201ENST00000261707 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
SLC6A4-201ENST00000261707 SSPOA2VEC9 5147 aa2.72□□□□□ -1.97
SLC6A4-201ENST00000261707 MDN1Q9NU22 5596 aa2.68□□□□□ -1.98
SLC6A4-201ENST00000261707 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
SLC6A4-201ENST00000261707 FSIP2Q5CZC0 6907 aa2.6□□□□□ -1.99
SLC6A4-201ENST00000261707 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
SLC6A4-201ENST00000261707 NEBP20929 6669 aa2.56□□□□□ -2
SLC6A4-201ENST00000261707 KMT2DO14686 5537 aa2.56□□□□□ -2
SLC6A4-201ENST00000261707 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
SLC6A4-201ENST00000261707 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
SLC6A4-201ENST00000261707 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
SLC6A4-201ENST00000261707 FCGBPQ9Y6R7 5405 aaPredicted RBP2.48□□□□□ -2.01
SLC6A4-201ENST00000261707 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
SLC6A4-201ENST00000261707 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
SLC6A4-201ENST00000261707 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
SLC6A4-201ENST00000261707 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
SLC6A4-201ENST00000261707 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
SLC6A4-201ENST00000261707 MUC12Q9UKN1 5478 aa2.35□□□□□ -2.03
SLC6A4-201ENST00000261707 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
SLC6A4-201ENST00000261707 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
SLC6A4-201ENST00000261707 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
SLC6A4-201ENST00000261707 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
SLC6A4-201ENST00000261707 KRTAP5-9P26371 169 aa2.18□□□□□ -2.06
SLC6A4-201ENST00000261707 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
SLC6A4-201ENST00000261707 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
SLC6A4-201ENST00000261707 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
SLC6A4-201ENST00000261707 KRTAP5-3Q6L8H2 238 aa1.97□□□□□ -2.09
SLC6A4-201ENST00000261707 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
SLC6A4-201ENST00000261707 KRTAP5-8O75690 187 aa1.78□□□□□ -2.13
SLC6A4-201ENST00000261707 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
SLC6A4-201ENST00000261707 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
SLC6A4-201ENST00000261707 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
SLC6A4-201ENST00000261707 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
SLC6A4-201ENST00000261707 KRTAP5-1Q6L8H4 278 aa1.47□□□□□ -2.17
SLC6A4-201ENST00000261707 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.38□□□□□ -2.19
SLC6A4-201ENST00000261707 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
SLC6A4-201ENST00000261707 KRTAP5-11Q6L8G4 156 aa1.35□□□□□ -2.19
SLC6A4-201ENST00000261707 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 65.7 ms