RNA–Protein interactions for RNA: ENST00000260947.8

BARD1-201, Transcript of BRCA1 associated RING domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BARD1, Length 5,499 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-201ENST00000260947 MT1MQ8N339 61 aa3.98□□□□□ -1.77
BARD1-201ENST00000260947 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.79
BARD1-201ENST00000260947 MT3P25713 68 aa3.88□□□□□ -1.79
BARD1-201ENST00000260947 MT4P47944 62 aa3.87□□□□□ -1.79
BARD1-201ENST00000260947 RNF213Q63HN8 5207 aa3.87□□□□□ -1.79
BARD1-201ENST00000260947 FAT4Q6V0I7 4981 aa3.86□□□□□ -1.79
BARD1-201ENST00000260947 UBR4Q5T4S7 5183 aa3.79□□□□□ -1.8
BARD1-201ENST00000260947 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
BARD1-201ENST00000260947 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
BARD1-201ENST00000260947 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
BARD1-201ENST00000260947 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
BARD1-201ENST00000260947 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
BARD1-201ENST00000260947 MT1AP04731 61 aa3.7□□□□□ -1.82
BARD1-201ENST00000260947 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
BARD1-201ENST00000260947 KRTAP6-3Q3LI67 103 aa3.68□□□□□ -1.82
BARD1-201ENST00000260947 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
BARD1-201ENST00000260947 PRM1P04553 51 aa3.67□□□□□ -1.82
BARD1-201ENST00000260947 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
BARD1-201ENST00000260947 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
BARD1-201ENST00000260947 FSIP2Q5CZC0 6907 aa3.63□□□□□ -1.83
BARD1-201ENST00000260947 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
BARD1-201ENST00000260947 MUC2Q02817 5179 aa3.59□□□□□ -1.84
BARD1-201ENST00000260947 KRTAP2-3P0C7H8 128 aa3.56□□□□□ -1.84
BARD1-201ENST00000260947 KRTAP2-4Q9BYR9 128 aa3.56□□□□□ -1.84
BARD1-201ENST00000260947 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
BARD1-201ENST00000260947 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
BARD1-201ENST00000260947 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
BARD1-201ENST00000260947 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
BARD1-201ENST00000260947 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
BARD1-201ENST00000260947 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
BARD1-201ENST00000260947 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
BARD1-201ENST00000260947 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
BARD1-201ENST00000260947 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
BARD1-201ENST00000260947 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
BARD1-201ENST00000260947 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
BARD1-201ENST00000260947 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
BARD1-201ENST00000260947 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
BARD1-201ENST00000260947 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
BARD1-201ENST00000260947 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
BARD1-201ENST00000260947 USH2AO75445 5202 aa3.21□□□□□ -1.9
BARD1-201ENST00000260947 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
BARD1-201ENST00000260947 NEBP20929 6669 aa3.06□□□□□ -1.92
BARD1-201ENST00000260947 KMT2DO14686 5537 aa3.05□□□□□ -1.92
BARD1-201ENST00000260947 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
BARD1-201ENST00000260947 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
BARD1-201ENST00000260947 MACF1Q9UPN3 7388 aaKnown RBP3□□□□□ -1.93
BARD1-201ENST00000260947 FCGBPQ9Y6R7 5405 aaPredicted RBP2.99□□□□□ -1.93
BARD1-201ENST00000260947 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.94
BARD1-201ENST00000260947 DSTQ03001 7570 aaKnown RBP2.9□□□□□ -1.95
BARD1-201ENST00000260947 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.95
BARD1-201ENST00000260947 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
BARD1-201ENST00000260947 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
BARD1-201ENST00000260947 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
BARD1-201ENST00000260947 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
BARD1-201ENST00000260947 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
BARD1-201ENST00000260947 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
BARD1-201ENST00000260947 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
BARD1-201ENST00000260947 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
BARD1-201ENST00000260947 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2
BARD1-201ENST00000260947 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
BARD1-201ENST00000260947 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
BARD1-201ENST00000260947 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
BARD1-201ENST00000260947 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
BARD1-201ENST00000260947 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
BARD1-201ENST00000260947 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
BARD1-201ENST00000260947 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
BARD1-201ENST00000260947 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.09
BARD1-201ENST00000260947 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
BARD1-201ENST00000260947 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
BARD1-201ENST00000260947 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
BARD1-201ENST00000260947 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
BARD1-201ENST00000260947 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
BARD1-201ENST00000260947 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
BARD1-201ENST00000260947 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
BARD1-201ENST00000260947 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
BARD1-201ENST00000260947 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
BARD1-201ENST00000260947 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms