RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
USP6-201ENST00000250066 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
USP6-201ENST00000250066 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
USP6-201ENST00000250066 MYCBP2O75592 4640 aa2.48□□□□□ -2.01
USP6-201ENST00000250066 RYR2Q92736 4967 aa2.47□□□□□ -2.01
USP6-201ENST00000250066 LCE4AQ5TA78 99 aa2.46□□□□□ -2.02
USP6-201ENST00000250066 RYR1P21817 5038 aa2.45□□□□□ -2.02
USP6-201ENST00000250066 ABCA13Q86UQ4 5058 aa2.44□□□□□ -2.02
USP6-201ENST00000250066 KRTAP4-9Q9BYQ8 210 aa2.42□□□□□ -2.02
USP6-201ENST00000250066 KRTAP2-3P0C7H8 128 aa2.42□□□□□ -2.02
USP6-201ENST00000250066 KRTAP4-3Q9BYR4 195 aa2.42□□□□□ -2.02
USP6-201ENST00000250066 KRTAP2-4Q9BYR9 128 aa2.42□□□□□ -2.02
USP6-201ENST00000250066 KRTAP2-1Q9BYU5 128 aa2.42□□□□□ -2.02
USP6-201ENST00000250066 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
USP6-201ENST00000250066 SYNE2Q8WXH0 6885 aaKnown RBP2.41□□□□□ -2.02
USP6-201ENST00000250066 SYNE1Q8NF91 8797 aaKnown RBP2.38□□□□□ -2.03
USP6-201ENST00000250066 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
USP6-201ENST00000250066 MT1AP04731 61 aa2.37□□□□□ -2.03
USP6-201ENST00000250066 HERC2O95714 4834 aa2.37□□□□□ -2.03
USP6-201ENST00000250066 KRTAP9-7A8MTY7 169 aa2.36□□□□□ -2.03
USP6-201ENST00000250066 KRTAP6-3Q3LI67 103 aa2.35□□□□□ -2.03
USP6-201ENST00000250066 UBR4Q5T4S7 5183 aa2.35□□□□□ -2.03
USP6-201ENST00000250066 LPAP08519 4548 aa2.35□□□□□ -2.03
USP6-201ENST00000250066 BIRC6Q9NR09 4857 aa2.34□□□□□ -2.04
USP6-201ENST00000250066 KRTAP19-2Q3LHN2 52 aa2.34□□□□□ -2.04
USP6-201ENST00000250066 HERC1Q15751 4861 aa2.32□□□□□ -2.04
USP6-201ENST00000250066 LCE2AQ5TA79 106 aaPredicted RBP2.31□□□□□ -2.04
USP6-201ENST00000250066 RNF213Q63HN8 5207 aa2.31□□□□□ -2.04
USP6-201ENST00000250066 HMCN2Q8NDA2 5059 aa2.27□□□□□ -2.05
USP6-201ENST00000250066 KRTAP2-2Q9BYT5 123 aa2.25□□□□□ -2.05
USP6-201ENST00000250066 LRP2P98164 4655 aa2.23□□□□□ -2.05
USP6-201ENST00000250066 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.22□□□□□ -2.05
USP6-201ENST00000250066 KRTAP19-7Q3SYF9 63 aa2.19□□□□□ -2.06
USP6-201ENST00000250066 KRTAP9-4Q9BYQ2 154 aa2.19□□□□□ -2.06
USP6-201ENST00000250066 KRTAP6-1Q3LI64 71 aa2.19□□□□□ -2.06
USP6-201ENST00000250066 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
USP6-201ENST00000250066 FAT4Q6V0I7 4981 aa2.08□□□□□ -2.08
USP6-201ENST00000250066 KRTAP4-11Q9BYQ6 195 aa2.05□□□□□ -2.08
USP6-201ENST00000250066 FSIP2Q5CZC0 6907 aa2.03□□□□□ -2.08
USP6-201ENST00000250066 KRTAP9-6A8MVA2 160 aa2.03□□□□□ -2.08
USP6-201ENST00000250066 MUC2Q02817 5179 aa2.01□□□□□ -2.09
USP6-201ENST00000250066 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
USP6-201ENST00000250066 USH2AO75445 5202 aa1.94□□□□□ -2.1
USP6-201ENST00000250066 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
USP6-201ENST00000250066 KRTAP5-9P26371 169 aa1.91□□□□□ -2.1
USP6-201ENST00000250066 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
USP6-201ENST00000250066 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
USP6-201ENST00000250066 MACF1Q9UPN3 7388 aaKnown RBP1.85□□□□□ -2.11
USP6-201ENST00000250066 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
USP6-201ENST00000250066 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
USP6-201ENST00000250066 KRTAP5-4Q6L8H1 288 aa1.77□□□□□ -2.13
USP6-201ENST00000250066 KRTAP4-6Q9BYQ5 205 aa1.77□□□□□ -2.13
USP6-201ENST00000250066 KRTAP4-12Q9BQ66 201 aa1.75□□□□□ -2.13
USP6-201ENST00000250066 KRTAP4-2Q9BYR5 136 aa1.75□□□□□ -2.13
USP6-201ENST00000250066 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
USP6-201ENST00000250066 NEBP20929 6669 aa1.65□□□□□ -2.15
USP6-201ENST00000250066 KMT2DO14686 5537 aa1.62□□□□□ -2.15
USP6-201ENST00000250066 MDN1Q9NU22 5596 aa1.6□□□□□ -2.15
USP6-201ENST00000250066 KRTAP5-5Q701N2 237 aaPredicted RBP1.52□□□□□ -2.17
USP6-201ENST00000250066 KRTAP5-3Q6L8H2 238 aa1.51□□□□□ -2.17
USP6-201ENST00000250066 MUC12Q9UKN1 5478 aa1.5□□□□□ -2.17
USP6-201ENST00000250066 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
USP6-201ENST00000250066 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
USP6-201ENST00000250066 KRTAP5-8O75690 187 aa1.29□□□□□ -2.2
USP6-201ENST00000250066 KRTAP5-2Q701N4 177 aa1.26□□□□□ -2.21
USP6-201ENST00000250066 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
USP6-201ENST00000250066 HMCN1Q96RW7 5635 aa1.25□□□□□ -2.21
USP6-201ENST00000250066 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
USP6-201ENST00000250066 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
USP6-201ENST00000250066 MUC5BQ9HC84 5762 aaPredicted RBP1.15□□□□□ -2.23
USP6-201ENST00000250066 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
USP6-201ENST00000250066 KRTAP5-7Q6L8G8 165 aa1.11□□□□□ -2.23
USP6-201ENST00000250066 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
USP6-201ENST00000250066 KRTAP5-1Q6L8H4 278 aa1.06□□□□□ -2.24
USP6-201ENST00000250066 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.04□□□□□ -2.24
USP6-201ENST00000250066 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
USP6-201ENST00000250066 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 109.1 ms