RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 MT1MQ8N339 61 aa3.2□□□□□ -1.9
VIL1-201ENST00000248444 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
VIL1-201ENST00000248444 LOC100996750A0A140TA64 210 aa3.14□□□□□ -1.91
VIL1-201ENST00000248444 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
VIL1-201ENST00000248444 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
VIL1-201ENST00000248444 FAT4Q6V0I7 4981 aa3.12□□□□□ -1.91
VIL1-201ENST00000248444 MT3P25713 68 aa3.1□□□□□ -1.91
VIL1-201ENST00000248444 KRTAP20-1Q3LI63 56 aa3.09□□□□□ -1.91
VIL1-201ENST00000248444 KRTAP9-7A8MTY7 169 aa3.08□□□□□ -1.92
VIL1-201ENST00000248444 FSIP2Q5CZC0 6907 aa3.08□□□□□ -1.92
VIL1-201ENST00000248444 RNF213Q63HN8 5207 aa3.06□□□□□ -1.92
VIL1-201ENST00000248444 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
VIL1-201ENST00000248444 LCE1DQ5T752 114 aa3.02□□□□□ -1.93
VIL1-201ENST00000248444 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
VIL1-201ENST00000248444 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
VIL1-201ENST00000248444 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
VIL1-201ENST00000248444 KRTAP6-3Q3LI67 103 aa2.99□□□□□ -1.93
VIL1-201ENST00000248444 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.97□□□□□ -1.93
VIL1-201ENST00000248444 SYNE2Q8WXH0 6885 aaKnown RBP2.95□□□□□ -1.94
VIL1-201ENST00000248444 MT1AP04731 61 aa2.93□□□□□ -1.94
VIL1-201ENST00000248444 KRTAP2-3P0C7H8 128 aa2.93□□□□□ -1.94
VIL1-201ENST00000248444 KRTAP2-4Q9BYR9 128 aa2.93□□□□□ -1.94
VIL1-201ENST00000248444 PRM1P04553 51 aa2.89□□□□□ -1.95
VIL1-201ENST00000248444 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
VIL1-201ENST00000248444 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
VIL1-201ENST00000248444 MUC2Q02817 5179 aa2.88□□□□□ -1.95
VIL1-201ENST00000248444 LCE5AQ5TCM9 118 aa2.87□□□□□ -1.95
VIL1-201ENST00000248444 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
VIL1-201ENST00000248444 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
VIL1-201ENST00000248444 LCE4AQ5TA78 99 aa2.8□□□□□ -1.96
VIL1-201ENST00000248444 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
VIL1-201ENST00000248444 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
VIL1-201ENST00000248444 KRTAP9-4Q9BYQ2 154 aa2.75□□□□□ -1.97
VIL1-201ENST00000248444 SYNE1Q8NF91 8797 aaKnown RBP2.68□□□□□ -1.98
VIL1-201ENST00000248444 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
VIL1-201ENST00000248444 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
VIL1-201ENST00000248444 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
VIL1-201ENST00000248444 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
VIL1-201ENST00000248444 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
VIL1-201ENST00000248444 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
VIL1-201ENST00000248444 MACF1Q9UPN3 7388 aaKnown RBP2.53□□□□□ -2
VIL1-201ENST00000248444 USH2AO75445 5202 aa2.53□□□□□ -2
VIL1-201ENST00000248444 NEBP20929 6669 aa2.49□□□□□ -2.01
VIL1-201ENST00000248444 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
VIL1-201ENST00000248444 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
VIL1-201ENST00000248444 KMT2DO14686 5537 aa2.45□□□□□ -2.02
VIL1-201ENST00000248444 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
VIL1-201ENST00000248444 FCGBPQ9Y6R7 5405 aaPredicted RBP2.39□□□□□ -2.03
VIL1-201ENST00000248444 DSTQ03001 7570 aaKnown RBP2.38□□□□□ -2.03
VIL1-201ENST00000248444 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
VIL1-201ENST00000248444 MUC12Q9UKN1 5478 aa2.21□□□□□ -2.06
VIL1-201ENST00000248444 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
VIL1-201ENST00000248444 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
VIL1-201ENST00000248444 KRTAP4-11Q9BYQ6 195 aa2.16□□□□□ -2.06
VIL1-201ENST00000248444 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
VIL1-201ENST00000248444 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
VIL1-201ENST00000248444 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
VIL1-201ENST00000248444 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
VIL1-201ENST00000248444 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
VIL1-201ENST00000248444 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
VIL1-201ENST00000248444 KRTAP5-3Q6L8H2 238 aa1.96□□□□□ -2.1
VIL1-201ENST00000248444 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
VIL1-201ENST00000248444 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
VIL1-201ENST00000248444 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
VIL1-201ENST00000248444 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
VIL1-201ENST00000248444 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
VIL1-201ENST00000248444 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
VIL1-201ENST00000248444 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
VIL1-201ENST00000248444 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
VIL1-201ENST00000248444 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
VIL1-201ENST00000248444 KRTAP5-1Q6L8H4 278 aa1.49□□□□□ -2.17
VIL1-201ENST00000248444 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
VIL1-201ENST00000248444 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
VIL1-201ENST00000248444 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
VIL1-201ENST00000248444 KRTAP5-7Q6L8G8 165 aa1.35□□□□□ -2.19
VIL1-201ENST00000248444 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
VIL1-201ENST00000248444 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms