RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 MT3P25713 68 aa4.02□□□□□ -1.77
NEK4-201ENST00000233027 KRTAP19-6Q3LI70 58 aa3.97□□□□□ -1.77
NEK4-201ENST00000233027 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
NEK4-201ENST00000233027 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
NEK4-201ENST00000233027 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
NEK4-201ENST00000233027 LCE1DQ5T752 114 aa3.91□□□□□ -1.78
NEK4-201ENST00000233027 HMCN2Q8NDA2 5059 aa3.84□□□□□ -1.79
NEK4-201ENST00000233027 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
NEK4-201ENST00000233027 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
NEK4-201ENST00000233027 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
NEK4-201ENST00000233027 KRTAP9-2Q9BYQ4 174 aa3.83□□□□□ -1.8
NEK4-201ENST00000233027 MT1AP04731 61 aa3.82□□□□□ -1.8
NEK4-201ENST00000233027 ABCA13Q86UQ4 5058 aa3.81□□□□□ -1.8
NEK4-201ENST00000233027 FAT4Q6V0I7 4981 aa3.75□□□□□ -1.81
NEK4-201ENST00000233027 EPPK1P58107 5090 aaKnown RBP3.74□□□□□ -1.81
NEK4-201ENST00000233027 LCE2AQ5TA79 106 aaPredicted RBP3.73□□□□□ -1.81
NEK4-201ENST00000233027 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
NEK4-201ENST00000233027 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.81
NEK4-201ENST00000233027 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
NEK4-201ENST00000233027 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.82
NEK4-201ENST00000233027 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
NEK4-201ENST00000233027 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.83
NEK4-201ENST00000233027 RNF213Q63HN8 5207 aa3.65□□□□□ -1.83
NEK4-201ENST00000233027 UBR4Q5T4S7 5183 aa3.64□□□□□ -1.83
NEK4-201ENST00000233027 KRTAP9-7A8MTY7 169 aa3.56□□□□□ -1.84
NEK4-201ENST00000233027 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
NEK4-201ENST00000233027 SYNE1Q8NF91 8797 aaKnown RBP3.52□□□□□ -1.85
NEK4-201ENST00000233027 KRTAP9-6A0A140TA67 174 aa3.52□□□□□ -1.85
NEK4-201ENST00000233027 MUC2Q02817 5179 aa3.52□□□□□ -1.85
NEK4-201ENST00000233027 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
NEK4-201ENST00000233027 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
NEK4-201ENST00000233027 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
NEK4-201ENST00000233027 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
NEK4-201ENST00000233027 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
NEK4-201ENST00000233027 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
NEK4-201ENST00000233027 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
NEK4-201ENST00000233027 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
NEK4-201ENST00000233027 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
NEK4-201ENST00000233027 KMT2DO14686 5537 aa3.22□□□□□ -1.89
NEK4-201ENST00000233027 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
NEK4-201ENST00000233027 FCGBPQ9Y6R7 5405 aaPredicted RBP3.16□□□□□ -1.9
NEK4-201ENST00000233027 USH2AO75445 5202 aa3.12□□□□□ -1.91
NEK4-201ENST00000233027 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
NEK4-201ENST00000233027 KRTAP4-6Q9BYQ5 205 aa2.97□□□□□ -1.93
NEK4-201ENST00000233027 DSTQ03001 7570 aaKnown RBP2.97□□□□□ -1.93
NEK4-201ENST00000233027 SSPOA2VEC9 5147 aa2.96□□□□□ -1.94
NEK4-201ENST00000233027 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
NEK4-201ENST00000233027 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
NEK4-201ENST00000233027 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
NEK4-201ENST00000233027 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
NEK4-201ENST00000233027 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
NEK4-201ENST00000233027 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
NEK4-201ENST00000233027 MUC12Q9UKN1 5478 aa2.78□□□□□ -1.96
NEK4-201ENST00000233027 NEBP20929 6669 aa2.77□□□□□ -1.97
NEK4-201ENST00000233027 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
NEK4-201ENST00000233027 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
NEK4-201ENST00000233027 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
NEK4-201ENST00000233027 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
NEK4-201ENST00000233027 MDN1Q9NU22 5596 aa2.42□□□□□ -2.02
NEK4-201ENST00000233027 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
NEK4-201ENST00000233027 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
NEK4-201ENST00000233027 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
NEK4-201ENST00000233027 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
NEK4-201ENST00000233027 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
NEK4-201ENST00000233027 GPR98Q8WXG9 6306 aa2.04□□□□□ -2.08
NEK4-201ENST00000233027 KRTAP5-2Q701N4 177 aa2.02□□□□□ -2.09
NEK4-201ENST00000233027 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
NEK4-201ENST00000233027 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
NEK4-201ENST00000233027 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
NEK4-201ENST00000233027 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
NEK4-201ENST00000233027 AHNAK2Q8IVF2 5795 aa1.82□□□□□ -2.12
NEK4-201ENST00000233027 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
NEK4-201ENST00000233027 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
NEK4-201ENST00000233027 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
NEK4-201ENST00000233027 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
NEK4-201ENST00000233027 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
NEK4-201ENST00000233027 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 99.9 ms