RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 UBR4Q5T4S7 5183 aa3.52□□□□□ -1.85
PCDH12-201ENST00000231484 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
PCDH12-201ENST00000231484 FLGP20930 4061 aaPredicted RBP3.5□□□□□ -1.85
PCDH12-201ENST00000231484 RNF213Q63HN8 5207 aa3.48□□□□□ -1.85
PCDH12-201ENST00000231484 MT3P25713 68 aa3.47□□□□□ -1.85
PCDH12-201ENST00000231484 MT1MQ8N339 61 aa3.46□□□□□ -1.86
PCDH12-201ENST00000231484 KRTAP19-2Q3LHN2 52 aa3.45□□□□□ -1.86
PCDH12-201ENST00000231484 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
PCDH12-201ENST00000231484 MUC17Q685J3 4493 aa3.43□□□□□ -1.86
PCDH12-201ENST00000231484 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.87
PCDH12-201ENST00000231484 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
PCDH12-201ENST00000231484 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
PCDH12-201ENST00000231484 FAT4Q6V0I7 4981 aa3.34□□□□□ -1.87
PCDH12-201ENST00000231484 MT1AP04731 61 aa3.32□□□□□ -1.88
PCDH12-201ENST00000231484 KRTAP19-6Q3LI70 58 aa3.28□□□□□ -1.88
PCDH12-201ENST00000231484 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
PCDH12-201ENST00000231484 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
PCDH12-201ENST00000231484 KRTAP9-2Q9BYQ4 174 aa3.24□□□□□ -1.89
PCDH12-201ENST00000231484 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
PCDH12-201ENST00000231484 LCE2AQ5TA79 106 aaPredicted RBP3.23□□□□□ -1.89
PCDH12-201ENST00000231484 FSIP2Q5CZC0 6907 aa3.22□□□□□ -1.89
PCDH12-201ENST00000231484 KRTAP9-7A8MTY7 169 aa3.19□□□□□ -1.9
PCDH12-201ENST00000231484 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
PCDH12-201ENST00000231484 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.9
PCDH12-201ENST00000231484 KRTAP9-6A0A140TA67 174 aa3.13□□□□□ -1.91
PCDH12-201ENST00000231484 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
PCDH12-201ENST00000231484 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
PCDH12-201ENST00000231484 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
PCDH12-201ENST00000231484 MUC2Q02817 5179 aa3.04□□□□□ -1.92
PCDH12-201ENST00000231484 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
PCDH12-201ENST00000231484 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
PCDH12-201ENST00000231484 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
PCDH12-201ENST00000231484 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
PCDH12-201ENST00000231484 LCE1AQ5T7P2 110 aa3.03□□□□□ -1.92
PCDH12-201ENST00000231484 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
PCDH12-201ENST00000231484 USH2AO75445 5202 aa2.93□□□□□ -1.94
PCDH12-201ENST00000231484 KRTAP6-3Q3LI67 103 aa2.84□□□□□ -1.96
PCDH12-201ENST00000231484 SSPOA2VEC9 5147 aa2.79□□□□□ -1.96
PCDH12-201ENST00000231484 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.79□□□□□ -1.96
PCDH12-201ENST00000231484 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
PCDH12-201ENST00000231484 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
PCDH12-201ENST00000231484 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
PCDH12-201ENST00000231484 KMT2DO14686 5537 aa2.73□□□□□ -1.97
PCDH12-201ENST00000231484 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
PCDH12-201ENST00000231484 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
PCDH12-201ENST00000231484 MACF1Q9UPN3 7388 aaKnown RBP2.61□□□□□ -1.99
PCDH12-201ENST00000231484 MDN1Q9NU22 5596 aa2.6□□□□□ -1.99
PCDH12-201ENST00000231484 NEBP20929 6669 aa2.59□□□□□ -1.99
PCDH12-201ENST00000231484 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
PCDH12-201ENST00000231484 DSTQ03001 7570 aaKnown RBP2.54□□□□□ -2
PCDH12-201ENST00000231484 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
PCDH12-201ENST00000231484 KRTAP4-6Q9BYQ5 205 aa2.49□□□□□ -2.01
PCDH12-201ENST00000231484 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
PCDH12-201ENST00000231484 MUC12Q9UKN1 5478 aa2.48□□□□□ -2.01
PCDH12-201ENST00000231484 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
PCDH12-201ENST00000231484 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
PCDH12-201ENST00000231484 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.02
PCDH12-201ENST00000231484 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.02
PCDH12-201ENST00000231484 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
PCDH12-201ENST00000231484 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
PCDH12-201ENST00000231484 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
PCDH12-201ENST00000231484 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
PCDH12-201ENST00000231484 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
PCDH12-201ENST00000231484 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
PCDH12-201ENST00000231484 KRTAP5-3Q6L8H2 238 aa1.9□□□□□ -2.11
PCDH12-201ENST00000231484 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
PCDH12-201ENST00000231484 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
PCDH12-201ENST00000231484 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
PCDH12-201ENST00000231484 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
PCDH12-201ENST00000231484 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
PCDH12-201ENST00000231484 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
PCDH12-201ENST00000231484 KRTAP5-1Q6L8H4 278 aa1.62□□□□□ -2.15
PCDH12-201ENST00000231484 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
PCDH12-201ENST00000231484 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
PCDH12-201ENST00000231484 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
PCDH12-201ENST00000231484 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
PCDH12-201ENST00000231484 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 53.3 ms