RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 KRTAP19-6Q3LI70 58 aa4.33□□□□□ -1.72
HCFC2-201ENST00000229330 HMCN2Q8NDA2 5059 aa4.3□□□□□ -1.72
HCFC2-201ENST00000229330 PRM1P04553 51 aa4.3□□□□□ -1.72
HCFC2-201ENST00000229330 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
HCFC2-201ENST00000229330 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
HCFC2-201ENST00000229330 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
HCFC2-201ENST00000229330 FSIP2Q5CZC0 6907 aa4.27□□□□□ -1.73
HCFC2-201ENST00000229330 KRTAP9-2Q9BYQ4 174 aa4.24□□□□□ -1.73
HCFC2-201ENST00000229330 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
HCFC2-201ENST00000229330 MT1MQ8N339 61 aa4.21□□□□□ -1.74
HCFC2-201ENST00000229330 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
HCFC2-201ENST00000229330 MUC2Q02817 5179 aa4.16□□□□□ -1.74
HCFC2-201ENST00000229330 KRTAP19-7Q3SYF9 63 aa4.14□□□□□ -1.75
HCFC2-201ENST00000229330 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
HCFC2-201ENST00000229330 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
HCFC2-201ENST00000229330 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
HCFC2-201ENST00000229330 MT3P25713 68 aa4.03□□□□□ -1.76
HCFC2-201ENST00000229330 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
HCFC2-201ENST00000229330 MT4P47944 62 aa3.95□□□□□ -1.78
HCFC2-201ENST00000229330 KRTAP9-6A0A140TA67 174 aa3.94□□□□□ -1.78
HCFC2-201ENST00000229330 MT1AP04731 61 aa3.93□□□□□ -1.78
HCFC2-201ENST00000229330 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
HCFC2-201ENST00000229330 LCE1AQ5T7P2 110 aa3.77□□□□□ -1.81
HCFC2-201ENST00000229330 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
HCFC2-201ENST00000229330 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
HCFC2-201ENST00000229330 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
HCFC2-201ENST00000229330 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
HCFC2-201ENST00000229330 USH2AO75445 5202 aa3.75□□□□□ -1.81
HCFC2-201ENST00000229330 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
HCFC2-201ENST00000229330 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
HCFC2-201ENST00000229330 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
HCFC2-201ENST00000229330 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.69□□□□□ -1.82
HCFC2-201ENST00000229330 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.82
HCFC2-201ENST00000229330 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
HCFC2-201ENST00000229330 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
HCFC2-201ENST00000229330 FCGBPQ9Y6R7 5405 aaPredicted RBP3.6□□□□□ -1.83
HCFC2-201ENST00000229330 KMT2DO14686 5537 aa3.59□□□□□ -1.84
HCFC2-201ENST00000229330 DSTQ03001 7570 aaKnown RBP3.51□□□□□ -1.85
HCFC2-201ENST00000229330 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
HCFC2-201ENST00000229330 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
HCFC2-201ENST00000229330 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
HCFC2-201ENST00000229330 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
HCFC2-201ENST00000229330 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
HCFC2-201ENST00000229330 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
HCFC2-201ENST00000229330 NEBP20929 6669 aa3.18□□□□□ -1.9
HCFC2-201ENST00000229330 KRTAP4-11Q9BYQ6 195 aa3.16□□□□□ -1.9
HCFC2-201ENST00000229330 KRTAP5-5Q701N2 237 aaPredicted RBP3.15□□□□□ -1.9
HCFC2-201ENST00000229330 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
HCFC2-201ENST00000229330 MDN1Q9NU22 5596 aa3.09□□□□□ -1.92
HCFC2-201ENST00000229330 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
HCFC2-201ENST00000229330 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
HCFC2-201ENST00000229330 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
HCFC2-201ENST00000229330 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
HCFC2-201ENST00000229330 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
HCFC2-201ENST00000229330 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
HCFC2-201ENST00000229330 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
HCFC2-201ENST00000229330 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
HCFC2-201ENST00000229330 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
HCFC2-201ENST00000229330 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
HCFC2-201ENST00000229330 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
HCFC2-201ENST00000229330 MUC5ACP98088 5654 aa2.58□□□□□ -2
HCFC2-201ENST00000229330 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
HCFC2-201ENST00000229330 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
HCFC2-201ENST00000229330 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
HCFC2-201ENST00000229330 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
HCFC2-201ENST00000229330 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
HCFC2-201ENST00000229330 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
HCFC2-201ENST00000229330 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
HCFC2-201ENST00000229330 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
HCFC2-201ENST00000229330 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
HCFC2-201ENST00000229330 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
HCFC2-201ENST00000229330 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
HCFC2-201ENST00000229330 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
HCFC2-201ENST00000229330 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
HCFC2-201ENST00000229330 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
HCFC2-201ENST00000229330 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
HCFC2-201ENST00000229330 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 110.2 ms