RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 FAT4Q6V0I7 4981 aa1.45□□□□□ -2.18
KRR1-201ENST00000229214 LCE5AQ5TCM9 118 aa1.45□□□□□ -2.18
KRR1-201ENST00000229214 PRM1P04553 51 aa1.45□□□□□ -2.18
KRR1-201ENST00000229214 MYCBP2O75592 4640 aa1.43□□□□□ -2.18
KRR1-201ENST00000229214 KRTAP2-2Q9BYT5 123 aa1.43□□□□□ -2.18
KRR1-201ENST00000229214 LCE1DQ5T752 114 aa1.42□□□□□ -2.18
KRR1-201ENST00000229214 PLECQ15149 4684 aaKnown RBP1.42□□□□□ -2.18
KRR1-201ENST00000229214 GPR98Q8WXG9 6306 aa1.42□□□□□ -2.18
KRR1-201ENST00000229214 KRTAP20-1Q3LI63 56 aa1.42□□□□□ -2.18
KRR1-201ENST00000229214 MUC2Q02817 5179 aa1.42□□□□□ -2.18
KRR1-201ENST00000229214 STARD9Q9P2P6 4700 aa1.41□□□□□ -2.18
KRR1-201ENST00000229214 LRP1BQ9NZR2 4599 aa1.4□□□□□ -2.19
KRR1-201ENST00000229214 TNXBP22105 4242 aa1.4□□□□□ -2.19
KRR1-201ENST00000229214 LCE1CQ5T751 118 aa1.39□□□□□ -2.19
KRR1-201ENST00000229214 LCE1EQ5T753 118 aa1.39□□□□□ -2.19
KRR1-201ENST00000229214 LCE1FQ5T754 118 aa1.39□□□□□ -2.19
KRR1-201ENST00000229214 HERC1Q15751 4861 aa1.39□□□□□ -2.19
KRR1-201ENST00000229214 KRTAP19-7Q3SYF9 63 aa1.38□□□□□ -2.19
KRR1-201ENST00000229214 MDN1Q9NU22 5596 aa1.38□□□□□ -2.19
KRR1-201ENST00000229214 KRTAP9-4Q9BYQ2 154 aa1.38□□□□□ -2.19
KRR1-201ENST00000229214 KRTAP9-9Q9BYP9 154 aa1.38□□□□□ -2.19
KRR1-201ENST00000229214 KRTAP4-8A0A0G2JLE6 195 aa1.38□□□□□ -2.19
KRR1-201ENST00000229214 KRTAP4-8Q9BYQ9 185 aa1.38□□□□□ -2.19
KRR1-201ENST00000229214 FSIP2Q5CZC0 6907 aa1.36□□□□□ -2.19
KRR1-201ENST00000229214 KRTAP9-6A0A140TA67 174 aa1.36□□□□□ -2.19
KRR1-201ENST00000229214 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
KRR1-201ENST00000229214 KRTAP9-2Q9BYQ4 174 aa1.35□□□□□ -2.19
KRR1-201ENST00000229214 KRTAP9-6A8MVA2 160 aa1.35□□□□□ -2.19
KRR1-201ENST00000229214 KRTAP19-2Q3LHN2 52 aa1.34□□□□□ -2.19
KRR1-201ENST00000229214 SYNE2Q8WXH0 6885 aaKnown RBP1.34□□□□□ -2.19
KRR1-201ENST00000229214 LRP2P98164 4655 aa1.33□□□□□ -2.2
KRR1-201ENST00000229214 OBSCNQ5VST9 7968 aa1.33□□□□□ -2.2
KRR1-201ENST00000229214 KRTAP5-9P26371 169 aa1.31□□□□□ -2.2
KRR1-201ENST00000229214 DSTQ03001 7570 aaKnown RBP1.31□□□□□ -2.2
KRR1-201ENST00000229214 SSPOA2VEC9 5147 aa1.3□□□□□ -2.2
KRR1-201ENST00000229214 MUC17Q685J3 4493 aa1.3□□□□□ -2.2
KRR1-201ENST00000229214 KRTAP9-7A8MTY7 169 aa1.29□□□□□ -2.2
KRR1-201ENST00000229214 KRTAP4-9Q9BYQ8 210 aa1.29□□□□□ -2.2
KRR1-201ENST00000229214 KMT2DO14686 5537 aa1.29□□□□□ -2.2
KRR1-201ENST00000229214 KRTAP4-7Q9BYR0 210 aa1.27□□□□□ -2.21
KRR1-201ENST00000229214 RNF213Q63HN8 5207 aa1.27□□□□□ -2.21
KRR1-201ENST00000229214 KRTAP6-2Q3LI66 62 aa1.26□□□□□ -2.21
KRR1-201ENST00000229214 LPAP08519 4548 aa1.25□□□□□ -2.21
KRR1-201ENST00000229214 NEBP20929 6669 aa1.24□□□□□ -2.21
KRR1-201ENST00000229214 LOC100996750A0A140TA64 210 aa1.22□□□□□ -2.21
KRR1-201ENST00000229214 MUC19Q7Z5P9 8384 aa1.2□□□□□ -2.22
KRR1-201ENST00000229214 USH2AO75445 5202 aa1.2□□□□□ -2.22
KRR1-201ENST00000229214 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
KRR1-201ENST00000229214 KRTAP4-3Q9BYR4 195 aa1.19□□□□□ -2.22
KRR1-201ENST00000229214 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.18□□□□□ -2.22
KRR1-201ENST00000229214 KRTAP5-2Q701N4 177 aa1.18□□□□□ -2.22
KRR1-201ENST00000229214 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
KRR1-201ENST00000229214 KRTAP6-1Q3LI64 71 aa1.16□□□□□ -2.22
KRR1-201ENST00000229214 KRTAP5-4Q6L8H1 288 aa1.14□□□□□ -2.23
KRR1-201ENST00000229214 MUC5BQ9HC84 5762 aaPredicted RBP1.14□□□□□ -2.23
KRR1-201ENST00000229214 KRTAP20-2Q3LI61 65 aa1.14□□□□□ -2.23
KRR1-201ENST00000229214 KRTAP4-2Q9BYR5 136 aa1.09□□□□□ -2.23
KRR1-201ENST00000229214 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.24
KRR1-201ENST00000229214 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.08□□□□□ -2.24
KRR1-201ENST00000229214 KRTAP4-6Q9BYQ5 205 aa1.07□□□□□ -2.24
KRR1-201ENST00000229214 KRTAP4-11Q9BYQ6 195 aa1.05□□□□□ -2.24
KRR1-201ENST00000229214 HMCN1Q96RW7 5635 aa1.04□□□□□ -2.24
KRR1-201ENST00000229214 KRTAP5-3Q6L8H2 238 aa1.04□□□□□ -2.24
KRR1-201ENST00000229214 FCGBPQ9Y6R7 5405 aaPredicted RBP1.02□□□□□ -2.25
KRR1-201ENST00000229214 KRTAP4-12Q9BQ66 201 aa1.01□□□□□ -2.25
KRR1-201ENST00000229214 MUC12Q9UKN1 5478 aa1□□□□□ -2.25
KRR1-201ENST00000229214 KRTAP4-4Q9BYR3 166 aa0.97□□□□□ -2.25
KRR1-201ENST00000229214 KRTAP5-5Q701N2 237 aaPredicted RBP0.96□□□□□ -2.26
KRR1-201ENST00000229214 KRTAP5-8O75690 187 aa0.95□□□□□ -2.26
KRR1-201ENST00000229214 KRTAP5-11Q6L8G4 156 aa0.95□□□□□ -2.26
KRR1-201ENST00000229214 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
KRR1-201ENST00000229214 KRTAP5-7Q6L8G8 165 aa0.84□□□□□ -2.27
KRR1-201ENST00000229214 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
KRR1-201ENST00000229214 KRTAP5-1Q6L8H4 278 aa0.81□□□□□ -2.28
KRR1-201ENST00000229214 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
KRR1-201ENST00000229214 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
KRR1-201ENST00000229214 KRTAP21-2Q3LI59 83 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 85.3 ms