RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 KRTAP19-2Q3LHN2 52 aa4.2□□□□□ -1.74
UBR5-201ENST00000220959 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
UBR5-201ENST00000220959 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
UBR5-201ENST00000220959 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
UBR5-201ENST00000220959 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
UBR5-201ENST00000220959 MUC17Q685J3 4493 aa4.15□□□□□ -1.74
UBR5-201ENST00000220959 HERC2O95714 4834 aa4.15□□□□□ -1.74
UBR5-201ENST00000220959 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
UBR5-201ENST00000220959 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
UBR5-201ENST00000220959 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
UBR5-201ENST00000220959 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
UBR5-201ENST00000220959 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
UBR5-201ENST00000220959 RYR2Q92736 4967 aa4.09□□□□□ -1.75
UBR5-201ENST00000220959 KRTAP19-7Q3SYF9 63 aa4.07□□□□□ -1.76
UBR5-201ENST00000220959 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
UBR5-201ENST00000220959 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
UBR5-201ENST00000220959 KMT2CQ8NEZ4 4911 aaKnown RBP4□□□□□ -1.77
UBR5-201ENST00000220959 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
UBR5-201ENST00000220959 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
UBR5-201ENST00000220959 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
UBR5-201ENST00000220959 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
UBR5-201ENST00000220959 LCE2AQ5TA79 106 aaPredicted RBP3.93□□□□□ -1.78
UBR5-201ENST00000220959 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
UBR5-201ENST00000220959 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
UBR5-201ENST00000220959 HYDINQ4G0P3 5121 aa3.87□□□□□ -1.79
UBR5-201ENST00000220959 KIAA1109Q2LD37 5005 aa3.85□□□□□ -1.79
UBR5-201ENST00000220959 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
UBR5-201ENST00000220959 HMCN2Q8NDA2 5059 aa3.77□□□□□ -1.81
UBR5-201ENST00000220959 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.76□□□□□ -1.81
UBR5-201ENST00000220959 BIRC6Q9NR09 4857 aa3.75□□□□□ -1.81
UBR5-201ENST00000220959 PCLOQ9Y6V0 5065 aa3.72□□□□□ -1.81
UBR5-201ENST00000220959 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
UBR5-201ENST00000220959 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
UBR5-201ENST00000220959 FSIP2Q5CZC0 6907 aa3.63□□□□□ -1.83
UBR5-201ENST00000220959 EPPK1P58107 5090 aaKnown RBP3.6□□□□□ -1.83
UBR5-201ENST00000220959 FAT4Q6V0I7 4981 aa3.43□□□□□ -1.86
UBR5-201ENST00000220959 MUC2Q02817 5179 aa3.43□□□□□ -1.86
UBR5-201ENST00000220959 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
UBR5-201ENST00000220959 ABCA13Q86UQ4 5058 aa3.34□□□□□ -1.88
UBR5-201ENST00000220959 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
UBR5-201ENST00000220959 UBR4Q5T4S7 5183 aa3.31□□□□□ -1.88
UBR5-201ENST00000220959 RNF213Q63HN8 5207 aa3.25□□□□□ -1.89
UBR5-201ENST00000220959 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
UBR5-201ENST00000220959 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.9
UBR5-201ENST00000220959 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
UBR5-201ENST00000220959 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
UBR5-201ENST00000220959 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
UBR5-201ENST00000220959 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
UBR5-201ENST00000220959 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
UBR5-201ENST00000220959 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
UBR5-201ENST00000220959 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
UBR5-201ENST00000220959 NEBP20929 6669 aa2.96□□□□□ -1.94
UBR5-201ENST00000220959 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
UBR5-201ENST00000220959 KMT2DO14686 5537 aa2.89□□□□□ -1.95
UBR5-201ENST00000220959 USH2AO75445 5202 aa2.77□□□□□ -1.97
UBR5-201ENST00000220959 SSPOA2VEC9 5147 aa2.72□□□□□ -1.97
UBR5-201ENST00000220959 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
UBR5-201ENST00000220959 MDN1Q9NU22 5596 aa2.61□□□□□ -1.99
UBR5-201ENST00000220959 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
UBR5-201ENST00000220959 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
UBR5-201ENST00000220959 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
UBR5-201ENST00000220959 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
UBR5-201ENST00000220959 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
UBR5-201ENST00000220959 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
UBR5-201ENST00000220959 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
UBR5-201ENST00000220959 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
UBR5-201ENST00000220959 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
UBR5-201ENST00000220959 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
UBR5-201ENST00000220959 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
UBR5-201ENST00000220959 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.09
UBR5-201ENST00000220959 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
UBR5-201ENST00000220959 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
UBR5-201ENST00000220959 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
UBR5-201ENST00000220959 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
UBR5-201ENST00000220959 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.15
UBR5-201ENST00000220959 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
UBR5-201ENST00000220959 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 17.8 ms