RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 RNF213Q63HN8 5207 aa3.78□□□□□ -1.8
TRO-201ENST00000173898 MT1MQ8N339 61 aa3.78□□□□□ -1.8
TRO-201ENST00000173898 KRTAP19-6Q3LI70 58 aa3.74□□□□□ -1.81
TRO-201ENST00000173898 HMCN2Q8NDA2 5059 aa3.74□□□□□ -1.81
TRO-201ENST00000173898 MUC2Q02817 5179 aa3.73□□□□□ -1.81
TRO-201ENST00000173898 LOC100996750A0A140TA64 210 aa3.73□□□□□ -1.81
TRO-201ENST00000173898 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
TRO-201ENST00000173898 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
TRO-201ENST00000173898 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
TRO-201ENST00000173898 LCE2AQ5TA79 106 aaPredicted RBP3.66□□□□□ -1.82
TRO-201ENST00000173898 LCE2DQ5TA82 110 aaPredicted RBP3.65□□□□□ -1.82
TRO-201ENST00000173898 MT3P25713 68 aa3.64□□□□□ -1.83
TRO-201ENST00000173898 KRTAP9-2Q9BYQ4 174 aa3.58□□□□□ -1.84
TRO-201ENST00000173898 PRM1P04553 51 aa3.57□□□□□ -1.84
TRO-201ENST00000173898 MT4P47944 62 aa3.56□□□□□ -1.84
TRO-201ENST00000173898 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
TRO-201ENST00000173898 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
TRO-201ENST00000173898 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
TRO-201ENST00000173898 MT1AP04731 61 aa3.5□□□□□ -1.85
TRO-201ENST00000173898 KRTAP4-9Q9BYQ8 210 aa3.49□□□□□ -1.85
TRO-201ENST00000173898 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
TRO-201ENST00000173898 SYNE2Q8WXH0 6885 aaKnown RBP3.46□□□□□ -1.86
TRO-201ENST00000173898 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
TRO-201ENST00000173898 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
TRO-201ENST00000173898 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
TRO-201ENST00000173898 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
TRO-201ENST00000173898 USH2AO75445 5202 aa3.38□□□□□ -1.87
TRO-201ENST00000173898 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
TRO-201ENST00000173898 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
TRO-201ENST00000173898 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
TRO-201ENST00000173898 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
TRO-201ENST00000173898 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
TRO-201ENST00000173898 MACF1Q9UPN3 7388 aaKnown RBP3.24□□□□□ -1.89
TRO-201ENST00000173898 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
TRO-201ENST00000173898 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
TRO-201ENST00000173898 KMT2DO14686 5537 aa3.18□□□□□ -1.9
TRO-201ENST00000173898 KRTAP9-7A8MTY7 169 aa3.17□□□□□ -1.9
TRO-201ENST00000173898 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
TRO-201ENST00000173898 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.11□□□□□ -1.91
TRO-201ENST00000173898 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
TRO-201ENST00000173898 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
TRO-201ENST00000173898 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
TRO-201ENST00000173898 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
TRO-201ENST00000173898 MDN1Q9NU22 5596 aa2.96□□□□□ -1.93
TRO-201ENST00000173898 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
TRO-201ENST00000173898 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
TRO-201ENST00000173898 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
TRO-201ENST00000173898 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
TRO-201ENST00000173898 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
TRO-201ENST00000173898 NEBP20929 6669 aa2.78□□□□□ -1.96
TRO-201ENST00000173898 KRTAP4-6Q9BYQ5 205 aa2.74□□□□□ -1.97
TRO-201ENST00000173898 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
TRO-201ENST00000173898 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
TRO-201ENST00000173898 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
TRO-201ENST00000173898 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
TRO-201ENST00000173898 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
TRO-201ENST00000173898 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
TRO-201ENST00000173898 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
TRO-201ENST00000173898 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
TRO-201ENST00000173898 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
TRO-201ENST00000173898 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
TRO-201ENST00000173898 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
TRO-201ENST00000173898 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
TRO-201ENST00000173898 KRTAP5-3Q6L8H2 238 aa2.14□□□□□ -2.07
TRO-201ENST00000173898 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.09
TRO-201ENST00000173898 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
TRO-201ENST00000173898 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
TRO-201ENST00000173898 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
TRO-201ENST00000173898 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
TRO-201ENST00000173898 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
TRO-201ENST00000173898 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
TRO-201ENST00000173898 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
TRO-201ENST00000173898 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
TRO-201ENST00000173898 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
TRO-201ENST00000173898 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
TRO-201ENST00000173898 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
TRO-201ENST00000173898 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 241.5 ms