RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 LCE2AQ5TA79 106 aaPredicted RBP7.24□□□□□ -1.25
TARBP1-201ENST00000040877 MT3P25713 68 aa7.23□□□□□ -1.25
TARBP1-201ENST00000040877 UBR4Q5T4S7 5183 aa7.09□□□□□ -1.27
TARBP1-201ENST00000040877 RNF213Q63HN8 5207 aa7.07□□□□□ -1.28
TARBP1-201ENST00000040877 FSIP2Q5CZC0 6907 aa7.05□□□□□ -1.28
TARBP1-201ENST00000040877 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
TARBP1-201ENST00000040877 KRTAP19-7Q3SYF9 63 aa7.01□□□□□ -1.29
TARBP1-201ENST00000040877 MT4P47944 62 aa6.99□□□□□ -1.29
TARBP1-201ENST00000040877 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
TARBP1-201ENST00000040877 SYNE1Q8NF91 8797 aaKnown RBP6.92□□□□□ -1.3
TARBP1-201ENST00000040877 KRTAP4-3Q9BYR4 195 aa6.91□□□□□ -1.3
TARBP1-201ENST00000040877 KRTAP9-6A0A140TA67 174 aa6.9□□□□□ -1.3
TARBP1-201ENST00000040877 PRM1P04553 51 aa6.9□□□□□ -1.3
TARBP1-201ENST00000040877 MT1AP04731 61 aa6.89□□□□□ -1.31
TARBP1-201ENST00000040877 HMCN2Q8NDA2 5059 aa6.8□□□□□ -1.32
TARBP1-201ENST00000040877 LCE1AQ5T7P2 110 aa6.76□□□□□ -1.33
TARBP1-201ENST00000040877 LCE1DQ5T752 114 aa6.68□□□□□ -1.34
TARBP1-201ENST00000040877 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
TARBP1-201ENST00000040877 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
TARBP1-201ENST00000040877 KRTAP2-1Q9BYU5 128 aa6.66□□□□□ -1.34
TARBP1-201ENST00000040877 LCE1BQ5T7P3 118 aa6.66□□□□□ -1.34
TARBP1-201ENST00000040877 KRTAP6-3Q3LI67 103 aa6.64□□□□□ -1.35
TARBP1-201ENST00000040877 MUC2Q02817 5179 aa6.58□□□□□ -1.36
TARBP1-201ENST00000040877 KRTAP20-1Q3LI63 56 aa6.57□□□□□ -1.36
TARBP1-201ENST00000040877 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
TARBP1-201ENST00000040877 LCE5AQ5TCM9 118 aa6.45□□□□□ -1.38
TARBP1-201ENST00000040877 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
TARBP1-201ENST00000040877 LCE4AQ5TA78 99 aa6.37□□□□□ -1.39
TARBP1-201ENST00000040877 SYNE2Q8WXH0 6885 aaKnown RBP6.36□□□□□ -1.39
TARBP1-201ENST00000040877 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.34□□□□□ -1.39
TARBP1-201ENST00000040877 KRTAP9-6A8MVA2 160 aa6.32□□□□□ -1.4
TARBP1-201ENST00000040877 KRTAP6-1Q3LI64 71 aa6.32□□□□□ -1.4
TARBP1-201ENST00000040877 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
TARBP1-201ENST00000040877 OBSCNQ5VST9 7968 aa6.27□□□□□ -1.41
TARBP1-201ENST00000040877 KRTAP6-2Q3LI66 62 aa6.24□□□□□ -1.41
TARBP1-201ENST00000040877 KRTAP2-2Q9BYT5 123 aa6.23□□□□□ -1.41
TARBP1-201ENST00000040877 USH2AO75445 5202 aa5.86□□□□□ -1.47
TARBP1-201ENST00000040877 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.47
TARBP1-201ENST00000040877 DSTQ03001 7570 aaKnown RBP5.82□□□□□ -1.48
TARBP1-201ENST00000040877 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
TARBP1-201ENST00000040877 LCE1CQ5T751 118 aa5.64□□□□□ -1.51
TARBP1-201ENST00000040877 LCE1EQ5T753 118 aa5.64□□□□□ -1.51
TARBP1-201ENST00000040877 LCE1FQ5T754 118 aa5.64□□□□□ -1.51
TARBP1-201ENST00000040877 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
TARBP1-201ENST00000040877 KMT2DO14686 5537 aa5.63□□□□□ -1.51
TARBP1-201ENST00000040877 NEBP20929 6669 aa5.46□□□□□ -1.54
TARBP1-201ENST00000040877 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
TARBP1-201ENST00000040877 SSPOA2VEC9 5147 aa5.42□□□□□ -1.54
TARBP1-201ENST00000040877 MUC12Q9UKN1 5478 aa5.34□□□□□ -1.56
TARBP1-201ENST00000040877 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
TARBP1-201ENST00000040877 MDN1Q9NU22 5596 aa5.27□□□□□ -1.57
TARBP1-201ENST00000040877 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
TARBP1-201ENST00000040877 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
TARBP1-201ENST00000040877 GPR98Q8WXG9 6306 aa5.01□□□□□ -1.61
TARBP1-201ENST00000040877 KRTAP5-4Q6L8H1 288 aa4.99□□□□□ -1.61
TARBP1-201ENST00000040877 MUC19Q7Z5P9 8384 aa4.98□□□□□ -1.61
TARBP1-201ENST00000040877 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
TARBP1-201ENST00000040877 KRTAP4-4Q9BYR3 166 aa4.54□□□□□ -1.68
TARBP1-201ENST00000040877 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
TARBP1-201ENST00000040877 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
TARBP1-201ENST00000040877 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
TARBP1-201ENST00000040877 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
TARBP1-201ENST00000040877 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.74
TARBP1-201ENST00000040877 HMCN1Q96RW7 5635 aa4.11□□□□□ -1.75
TARBP1-201ENST00000040877 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
TARBP1-201ENST00000040877 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
TARBP1-201ENST00000040877 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
TARBP1-201ENST00000040877 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
TARBP1-201ENST00000040877 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
TARBP1-201ENST00000040877 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
TARBP1-201ENST00000040877 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
TARBP1-201ENST00000040877 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.86
TARBP1-201ENST00000040877 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
TARBP1-201ENST00000040877 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
TARBP1-201ENST00000040877 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
TARBP1-201ENST00000040877 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
TARBP1-201ENST00000040877 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms