RNA–Protein interactions for RNA: ENSMUST00000168203.1

Ebf3-203, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf3, Length 3,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-203ENSMUST00000168203 Celsr3Q91ZI0 3301 aa9.76□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Gm6871L7N248 545 aa9.76□□□□□ -0.85
Ebf3-203ENSMUST00000168203 NbasE9Q411 2356 aa9.76□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Ighv14-2A0A075B5R7 117 aa9.76□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Trav7n-5A0A075B604 112 aa9.76□□□□□ -0.85
Ebf3-203ENSMUST00000168203 CckP09240 115 aa9.76□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Prickle3Q80VL3 624 aa9.76□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Fam241bQ9D882 120 aa9.76□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Trdv1A0A075B657 112 aa9.75□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Tmem30bQ8BHG3 353 aa9.75□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Gkn1Q9CR36 201 aa9.75□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Gm3285A0A1W2P7U0 201 aa9.75□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Trav7d-3Q5R1I1 112 aa9.75□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Srsf1Q6PDM2 248 aaKnown RBP9.75□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Fhl4Q8CDC8 279 aa9.75□□□□□ -0.85
Ebf3-203ENSMUST00000168203 VcanQ62059 3357 aa9.75□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Hbb-bsA8DUK4 147 aa9.74□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Ccl25O35903 144 aa9.74□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Hbb-b1P02088 147 aa9.74□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Prok1Q14A28 105 aa9.74□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Gm29644A0A087WPG2 191 aa9.74□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Ripply2Q2WG76 128 aa9.74□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Spsb3Q571F5 354 aa9.74□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Gm5468Q8C3D3 155 aa9.74□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Iglc1A0A0G2JE99 106 aa9.74□□□□□ -0.85
Ebf3-203ENSMUST00000168203 P01843 105 aa9.74□□□□□ -0.85
Ebf3-203ENSMUST00000168203 DscamQ9ERC8 2013 aa9.74□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Gm933J3QPC1 141 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 P04942 107 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 P06334 169 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Mrps21P58059 87 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Col6a3E9PWQ3 3284 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Gm15217A2CG07 155 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Smim20D3Z7Q2 69 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Gm11020F6ZGD5 61 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Samd5Q3V1H9 173 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Gm9961Q8BNV2 113 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Chac2Q9CQG1 178 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Trav14-2A0A075B694 121 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Gm17727E9Q4V7 109 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Necap2Q9D1J1 266 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 OtoglF7A4A7 2325 aa9.73□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Gm29423A0A087WRM1 55 aa9.72□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Rif1Q6PR54 2419 aaKnown RBP9.72□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Tcrg-C1A0A075B5Z0 172 aa9.72□□□□□ -0.85
Ebf3-203ENSMUST00000168203 CrygbP04344 175 aa9.72□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Oosp2Q4FZG8 168 aa9.72□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Gm9949Q8C9F4 104 aa9.72□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Pradc1Q9D9N8 188 aa9.72□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Rnf114Q9ET26 229 aa9.72□□□□□ -0.85
Ebf3-203ENSMUST00000168203 SetxA2AKX3 2646 aa9.72□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Trav19A0A0B4J1K4 119 aa9.72□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Tcl1b4P56844 120 aa9.72□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Spint3Q3UW09 88 aa9.72□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Olfr1199Q8VF94 310 aa9.72□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Igkv2-137A0A0B4J1H6 120 aa9.71□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Umad1E0CX23 159 aa9.71□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Gm10192Q3V0S1 108 aa9.71□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Tal2Q62282 108 aa9.71□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Myo15bI7HPW8 3033 aa9.71□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Psmg4P0C7N9 123 aa9.71□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Cd27P41272 250 aa9.71□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Q08AU9 97 aa9.71□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Tcf15Q60756 195 aa9.71□□□□□ -0.85
Ebf3-203ENSMUST00000168203 Ndufa3Q9CQ91 84 aa9.71□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Q9D131 166 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Avpi1Q9D7H4 142 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 IcosQ9WVS0 200 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Ep300B2RWS6 2412 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Luzp4B1AV09 449 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Gm15127B1AVZ5 449 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Gm15107B1B0X0 449 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 4930596D02RikQ3V0H9 216 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Gm15085Q62012 449 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Olfr312Q7TRZ9 308 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Tac4Q99N14 128 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Mrpl36Q99N90 102 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Atp5lQ9CPQ8 103 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Plekhb2Q9QZC7 221 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Prrc2cQ3TLH4 2846 aaKnown RBP9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Cox7cP17665 63 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Fgf6P21658 208 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Gm10767Q3TQP0 103 aa9.7□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Ighv3-6P18531 116 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Defa4P28311 92 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Ifitm2Q99J93 144 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Gm26938S4R185 226 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 2310009B15RikA0A0A6YWI4 143 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 P01723 117 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Map6d1Q14BB9 191 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Gm1968Q3T9I3 115 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Ubtd1Q91WB7 227 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 SNORCQ9CXL7 121 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Prrc2aQ7TSC1 2158 aaKnown RBP9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Tcrg-C3L7N479 172 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 P03985 172 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 P04943 107 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Spink6Q8BT20 105 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 A730015C16RikQ8C992 119 aa9.69□□□□□ -0.86
Ebf3-203ENSMUST00000168203 Tctex1d4Q8CDY7 219 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 88 ms