RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Sdhaf1Q3U276 118 aa11.52□□□□□ -0.56
Shroom3-202ENSMUST00000113054 Ntf4Q80VU4 209 aa11.52□□□□□ -0.56
Shroom3-202ENSMUST00000113054 P01793 123 aa11.52□□□□□ -0.57
Shroom3-202ENSMUST00000113054 BC049762Q8C601 163 aa11.52□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Ighv1-74A0A0G2JGK2 117 aa11.52□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Trav9d-3A0A075B695 113 aa11.52□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Ypel3P61237 119 aa11.52□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Pde6hP61249 83 aa11.52□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Inafm1E9PV59 130 aa11.52□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Gm17324Q8C6J8 137 aa11.52□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Igkv2-137A0A0B4J1H6 120 aa11.51□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Cdkn2aQ64364 169 aa11.51□□□□□ -0.57
Shroom3-202ENSMUST00000113054 StrcQ8VIM6 1809 aa11.51□□□□□ -0.57
Shroom3-202ENSMUST00000113054 CtsbP10605 339 aa11.51□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Pygo2Q80V76 405 aa11.51□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Dock7Q8R1A4 2130 aaKnown RBP11.51□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Rmi2Q3UPE3 149 aa11.51□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Myo7bQ99MZ6 2113 aa11.51□□□□□ -0.57
Shroom3-202ENSMUST00000113054 PtprfA2A8L5 1898 aa11.5□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Hbb-bsA8DUK4 147 aa11.5□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Hbb-b1P02088 147 aa11.5□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Tdgf1P51865 171 aa11.5□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Timm10bQ9WV96 100 aa11.5□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Pcnx1Q9QYC1 2344 aa11.5□□□□□ -0.57
Shroom3-202ENSMUST00000113054 BC048502Q80Y74 154 aa11.5□□□□□ -0.57
Shroom3-202ENSMUST00000113054 RhohQ9D3G9 191 aa11.5□□□□□ -0.57
Shroom3-202ENSMUST00000113054 H2al1jA2BFR3 109 aa11.5□□□□□ -0.57
Shroom3-202ENSMUST00000113054 NpbQ8K4P1 119 aa11.5□□□□□ -0.57
Shroom3-202ENSMUST00000113054 P0C1Z5 52 aa11.5□□□□□ -0.57
Shroom3-202ENSMUST00000113054 MdfiP70331 251 aa11.5□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Gm10604Q3V0X7 143 aa11.5□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Trav3-4A0A075B654 114 aa11.49□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Cox8bP48772 70 aa11.49□□□□□ -0.57
Shroom3-202ENSMUST00000113054 ColqO35348 457 aa11.49□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Col4a5Q63ZW6 1691 aa11.49□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Eid2bE9Q2Y0 151 aa11.49□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Pxt1Q8K459 51 aa11.49□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Rp1P56716 2095 aa11.49□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Defb29Q8BGW9 78 aa11.49□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Gm20730A0A075B5J6 119 aa11.48□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Gm27027S4R1M6 97 aa11.48□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Abca1P41233 2261 aa11.48□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Gm33815A0A087WNV3 176 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Trav9n-2A0A0G2JDP3 113 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Slc25a48Q8BW66 306 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Klhdc3Q8VEM9 382 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Lmo1Q924W9 156 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Ighv1-64A0A075B5X3 117 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 A530064D06RikQ8BNV8 229 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Carhsp1Q9CR86 148 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Frem1Q684R7 2191 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Gm10203F6QJ09 66 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 P01739 132 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Cox7a1P56392 80 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Dand5Q76LW6 185 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Trav14d-1A0A075B6B1 121 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 P01643 108 aa11.47□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Igkv1-122A0A140T8M9 119 aa11.46□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Socs3O35718 225 aa11.46□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Lect2O88803 151 aa11.46□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Defb18Q30KP5 85 aa11.46□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Gemin7Q9CWY4 129 aa11.46□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Igkv12-89A0A0G2JGW8 112 aa11.46□□□□□ -0.57
Shroom3-202ENSMUST00000113054 P01791 123 aa11.46□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Hoxb4P10284 250 aa11.46□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Col8a2P25318 699 aa11.46□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Loxl1P97873 607 aa11.46□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Igkv6-13A0A0G2JGY3 119 aa11.46□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Ube2wQ8VDW4 151 aa11.46□□□□□ -0.57
Shroom3-202ENSMUST00000113054 Igll1P20764 209 aa11.46□□□□□ -0.58
Shroom3-202ENSMUST00000113054 BlcapP62951 87 aa11.46□□□□□ -0.58
Shroom3-202ENSMUST00000113054 4933414I15RikQ9D4D5 133 aa11.46□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Tcf24V9GWT9 166 aa11.46□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Runx1Q03347 451 aa11.46□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Igf2rQ07113 2483 aaKnown RBP11.46□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Mrps12O35680 139 aa11.45□□□□□ -0.58
Shroom3-202ENSMUST00000113054 GfyJ3KML8 504 aa11.45□□□□□ -0.58
Shroom3-202ENSMUST00000113054 BC048562Q80ZQ7 204 aa11.45□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Ndufs7Q9DC70 224 aa11.45□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Olfr311Q5NC59 308 aa11.45□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Gm17455G3UW87 128 aa11.44□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Trip12G5E870 2025 aaKnown RBP11.44□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Cnot1Q6ZQ08 2375 aaKnown RBP11.44□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Fam216bQ8CC14 138 aa11.44□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Atg2aQ6P4T0 1914 aa11.44□□□□□ -0.58
Shroom3-202ENSMUST00000113054 LoxP28301 411 aa11.44□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Id3P41133 119 aa11.44□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Smim26Q3V460 107 aa11.44□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Hist2h2beQ64524 126 aa11.44□□□□□ -0.58
Shroom3-202ENSMUST00000113054 HampQ9EQ21 83 aa11.44□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Ighv1-50A0A075B5W1 117 aa11.44□□□□□ -0.58
Shroom3-202ENSMUST00000113054 9130213A22RikQ3V3T2 120 aa11.44□□□□□ -0.58
Shroom3-202ENSMUST00000113054 4930447F04RikA2AFR2 126 aa11.43□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Rpl32-psP17932 135 aa11.43□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Prpf8Q99PV0 2335 aaKnown RBP11.43□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Dopey2Q3UHQ6 2295 aa11.43□□□□□ -0.58
Shroom3-202ENSMUST00000113054 SprnQ8BWU1 147 aa11.43□□□□□ -0.58
Shroom3-202ENSMUST00000113054 P01794 123 aa11.43□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Gm5941Q497P9 117 aa11.43□□□□□ -0.58
Shroom3-202ENSMUST00000113054 Znf664Q4VA44 261 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 59.1 ms