RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Ca5aP23589 299 aa13.26□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Timm10bQ9WV96 100 aa13.26□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Sdhaf1Q3U276 118 aa13.26□□□□□ -0.29
Shroom3-201ENSMUST00000113051 P01793 123 aa13.25□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Ntf4Q80VU4 209 aa13.25□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Polr3kQ9CQZ7 108 aa13.25□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Bcl6bO88282 474 aa13.25□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Defb18Q30KP5 85 aa13.25□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Ube2cQ9D1C1 179 aa13.25□□□□□ -0.29
Shroom3-201ENSMUST00000113051 CtsbP10605 339 aa13.25□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Col8a2P25318 699 aa13.24□□□□□ -0.29
Shroom3-201ENSMUST00000113051 NpbQ8K4P1 119 aa13.24□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Eid2bE9Q2Y0 151 aa13.24□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Gm20730A0A075B5J6 119 aa13.24□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Med13Q5SWW4 2171 aa13.24□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Dpm2Q9Z324 84 aa13.24□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Trav14d-1A0A075B6B1 121 aa13.23□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Inafm1E9PV59 130 aa13.23□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Dock7Q8R1A4 2130 aaKnown RBP13.23□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Nr2c2apQ3TV70 140 aa13.23□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Trav9n-2A0A0G2JDP3 113 aa13.23□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Ypel3P61237 119 aa13.23□□□□□ -0.29
Shroom3-201ENSMUST00000113051 BC048502Q80Y74 154 aa13.23□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Defb29Q8BGW9 78 aa13.23□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Igkv1-122A0A140T8M9 119 aa13.23□□□□□ -0.29
Shroom3-201ENSMUST00000113051 P01643 108 aa13.23□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Ndufs7Q9DC70 224 aa13.23□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Slc25a48Q8BW66 306 aa13.22□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Pde6hP61249 83 aa13.22□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Gm10604Q3V0X7 143 aa13.22□□□□□ -0.29
Shroom3-201ENSMUST00000113051 P01739 132 aa13.22□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Klhdc3Q8VEM9 382 aa13.22□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Trav3-4A0A075B654 114 aa13.21□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Gm15128A2ADW8 449 aa13.21□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Luzp4B1AV09 449 aa13.21□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Gm15127B1AVZ5 449 aa13.21□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Gm15107B1B0X0 449 aa13.21□□□□□ -0.29
Shroom3-201ENSMUST00000113051 Gm15085Q62012 449 aa13.21□□□□□ -0.29
Shroom3-201ENSMUST00000113051 BlcapP62951 87 aa13.21□□□□□ -0.29
Shroom3-201ENSMUST00000113051 1700012A03RikQ9DAF1 130 aa13.21□□□□□ -0.29
Shroom3-201ENSMUST00000113051 AcacaQ5SWU9 2345 aa13.21□□□□□ -0.3
Shroom3-201ENSMUST00000113051 A530064D06RikQ8BNV8 229 aa13.21□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Ube2wQ8VDW4 151 aa13.21□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Trip12G5E870 2025 aaKnown RBP13.21□□□□□ -0.3
Shroom3-201ENSMUST00000113051 BC048562Q80ZQ7 204 aa13.2□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Ighv1-64A0A075B5X3 117 aa13.2□□□□□ -0.3
Shroom3-201ENSMUST00000113051 MdfiP70331 251 aa13.2□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Cdkn2aQ64364 169 aa13.2□□□□□ -0.3
Shroom3-201ENSMUST00000113051 RhohQ9D3G9 191 aa13.2□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Atg2aQ6P4T0 1914 aa13.2□□□□□ -0.3
Shroom3-201ENSMUST00000113051 P0C1Z5 52 aa13.2□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Plxna3P70208 1872 aa13.2□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Hbb-bsA8DUK4 147 aa13.2□□□□□ -0.3
Shroom3-201ENSMUST00000113051 GfyJ3KML8 504 aa13.2□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Hbb-b1P02088 147 aa13.2□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Gm17455G3UW87 128 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Wipf2Q6PEV3 440 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Tdgf1P51865 171 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Gm5941Q497P9 117 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 4933414I15RikQ9D4D5 133 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Cep250Q60952 2414 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Rp1P56716 2095 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Igkv6-13A0A0G2JGY3 119 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Timm17aQ9Z0V8 171 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Lect2O88803 151 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Runx1Q03347 451 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Olfr311Q5NC59 308 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Mrps12O35680 139 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 P01791 123 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Fam208bQ5DTT3 2382 aa13.19□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Igll1P20764 209 aa13.18□□□□□ -0.3
Shroom3-201ENSMUST00000113051 PrcdQ00LT2 53 aa13.18□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Bub3Q9WVA3 326 aa13.18□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Cox8bP48772 70 aa13.18□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Loxl1P97873 607 aa13.18□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Lmo1Q924W9 156 aa13.18□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Gm33815A0A087WNV3 176 aa13.17□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Socs3O35718 225 aa13.17□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Rpl32-psP17932 135 aa13.17□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Asxl3Q8C4A5 2259 aa13.17□□□□□ -0.3
Shroom3-201ENSMUST00000113051 C730034F03RikQ8BGL5 111 aa13.17□□□□□ -0.3
Shroom3-201ENSMUST00000113051 OdaphJ3QNT8 126 aa13.17□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Gm27027S4R1M6 97 aa13.17□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Igkv8-26A0A075B5N5 123 aa13.17□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Myo7bQ99MZ6 2113 aa13.17□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Ighv1-50A0A075B5W1 117 aa13.16□□□□□ -0.3
Shroom3-201ENSMUST00000113051 LoxP28301 411 aa13.16□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Fam216bQ8CC14 138 aa13.16□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Plxna4Q80UG2 1893 aa13.16□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Gm45861A0A1B0GRY3 1923 aa13.16□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Igkv12-89A0A0G2JGW8 112 aa13.16□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Gemin7Q9CWY4 129 aa13.16□□□□□ -0.3
Shroom3-201ENSMUST00000113051 UrahQ9CRB3 118 aa13.16□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Dmrtc1c1Q9D410 238 aa13.16□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Smim26Q3V460 107 aa13.16□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Tcf24V9GWT9 166 aa13.16□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Trbv13-1A0A0B4J1P8 112 aa13.16□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Ncor2Q9WU42 2472 aaKnown RBP13.15□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Armcx4E9PWM3 2356 aa13.15□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Pxt1Q8K459 51 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms