RNA–Protein interactions for RNA: ENSMUST00000112371.8

Scn1a-204, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-204ENSMUST00000112371 Hcfc1r1Q9CYQ5 120 aa4.37□□□□□ -1.71
Scn1a-204ENSMUST00000112371 1700010B08RikQ9DAI7 102 aa4.37□□□□□ -1.71
Scn1a-204ENSMUST00000112371 IcosQ9WVS0 200 aa4.37□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Notch1Q01705 2531 aa4.37□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Ighv3-1A0A075B5S6 116 aa4.37□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Neurog3P70661 214 aa4.37□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Wbp1P97764 304 aa4.37□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Znf22Q9ERU3 237 aa4.37□□□□□ -1.71
Scn1a-204ENSMUST00000112371 P01896 185 aa4.37□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Hoxd3P09027 433 aa4.37□□□□□ -1.71
Scn1a-204ENSMUST00000112371 MdkP12025 140 aa4.37□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Wnt5aP22725 380 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Loxl1P97873 607 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Rspo4Q8BJ73 228 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Ndufa11Q9D8B4 141 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 P01811 117 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Q99M08 65 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Lyzl4Q9D925 145 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Akap13E9Q394 2776 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Plpp2Q9DAX2 276 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Gm17677B3GLJ5 116 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Ins1P01325 108 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Gm10192Q3V0S1 108 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Klk15Q8CGR4 254 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 4930447F04RikA2AFR2 126 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 P01837 106 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Fgfrl1Q91V87 529 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Morn5Q9DAI9 170 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Defb5Q9EPV9 64 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Trbv14A0A140T8L9 115 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Igkv1-131A0A140T8M8 120 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 SelenowP63300 88 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Tpsg1Q9QUL7 311 aa4.36□□□□□ -1.71
Scn1a-204ENSMUST00000112371 P18525 117 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Gm10577Q3UDV9 132 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Glrx2Q923X4 156 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Sh2d6Q9D413 297 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Wdr38Q9D994 303 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Pgpep1Q9ESW8 209 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Ighv5-9A0A075B5Q2 117 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Gm3045A0A1D5RMA1 209 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Efna2P52801 209 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Q8R092 253 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Nxph3Q91VX5 252 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Znf580Q9DB38 172 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Ighv1-53A0A075B5W3 117 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Rnf39A2RT81 352 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Cpsf4lE9Q2N0 280 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Gata2O09100 480 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Ndufa1O35683 70 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Cox7a2lQ61387 111 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Vsig4F6TUL9 280 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Il3raP26952 396 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 VwceQ3U515 929 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Clec4b2Q67DU8 208 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Gm10188Q3V432 135 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Gm45623A0A1B0GSF6 103 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 P01795 144 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Tex36Q9D5N9 219 aa4.35□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Ighv1-55A0A075B5W6 117 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Igkv12-89A0A0G2JGW8 112 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Gm20878L7N244 103 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 P18530 117 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Cd27P41272 250 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Trav6d-4Q5R1I0 115 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Pom121l2Q5SW25 972 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Fam168aQ8BGZ2 244 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Trav12d-3A0A075B6A4 115 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Ndufb1P0DN34 57 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Defb30Q30KN4 75 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Q9D727 114 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Mlst8Q9DCJ1 326 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 GfyJ3KML8 504 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 NpyP57774 97 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Fgfbp3Q1HCM0 245 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Gm12888Q3UW77 119 aa4.34□□□□□ -1.71
Scn1a-204ENSMUST00000112371 Igkv4-80A0A075B5L7 116 aa4.34□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Gm10322F7D7I4 111 aa4.34□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Ebi3O35228 228 aa4.34□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Lgals4Q8K419 326 aa4.34□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Ighv7-1A0A075B5S2 121 aa4.34□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Defb21Q8C5Z4 100 aa4.34□□□□□ -1.72
Scn1a-204ENSMUST00000112371 C1ql2Q8CFR0 287 aa4.34□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Mrpl36Q99N90 102 aa4.34□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Lyzl1Q9CPX3 148 aa4.34□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Tmem223Q9CQE2 199 aaKnown RBP4.34□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Ighv1-9A0A0A6YW37 117 aa4.33□□□□□ -1.72
Scn1a-204ENSMUST00000112371 P01756 117 aa4.33□□□□□ -1.72
Scn1a-204ENSMUST00000112371 P01757 117 aa4.33□□□□□ -1.72
Scn1a-204ENSMUST00000112371 P01820 115 aa4.33□□□□□ -1.72
Scn1a-204ENSMUST00000112371 P06330 118 aa4.33□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Znf787Q8BIF9 381 aa4.33□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Olfr311Q5NC59 308 aa4.33□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Igkv14-130A0A0G2JF45 117 aa4.33□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Eif4ebp3Q80VV3 101 aa4.33□□□□□ -1.72
Scn1a-204ENSMUST00000112371 MNCb-2875Q9DCB3 74 aa4.33□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Gm10337F7DEP7 55 aa4.33□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Ly6lH3BJG9 140 aa4.33□□□□□ -1.72
Scn1a-204ENSMUST00000112371 P01748 117 aa4.33□□□□□ -1.72
Scn1a-204ENSMUST00000112371 Trav6-4A0A075B6B4 115 aa4.33□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 101.9 ms