RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Dchs1E9PVD3 3291 aa6.65□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Bglap3P54615 95 aa6.65□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Gm826Q3UQ74 109 aa6.65□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Rnase13Q5GAM7 153 aa6.65□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Zfp799Q8BHK4 648 aa6.65□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Klf7Q99JB0 301 aa6.65□□□□□ -1.35
Upf3b-201ENSMUST00000076265 TroQ6DIC6 2087 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Apc2Q9Z1K7 2274 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Vmn1r77E9PY60 306 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Ins1P01325 108 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 PpyP10601 100 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Morn2Q6UL01 79 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Hide1Q75VT8 222 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Cox19Q8K0C8 92 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Vmn1r74Q8R290 304 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Lrrk2Q5S006 2527 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Ptpn13Q64512 2453 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Trav15-2-dv6-2A0A075B650 123 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Ccl3P10855 92 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 9530003J23RikQ8BM26 151 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Olfr112Q8C0S2 320 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Rpp25lQ99JH1 163 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Ssr2Q9CPW5 183 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Timm17bQ9Z0V7 172 aa6.64□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Defa28D3Z1V9 94 aa6.63□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Gm2663F6R7E8 247 aaKnown RBP6.63□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Gm3646F6S692 53 aa6.63□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Ube2bP63147 152 aa6.63□□□□□ -1.35
Upf3b-201ENSMUST00000076265 1810009J06RikQ9CPN7 247 aa6.63□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Ormdl2Q9CQZ0 153 aa6.63□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Muc5acE9QAQ8 3455 aa6.63□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Akap9Q70FJ1 3797 aa6.63□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Ighv8-4A0A0A6YW26 117 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 A0A1Y7VJ07 166 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 2410141K09RikK7N769 464 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 CyctP00015 105 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Gpx1P11352 201 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Cox7cP17665 63 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 MifP34884 115 aaKnown RBP6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Znf691Q3TDE8 283 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Defb10Q8R2I8 73 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Dazap2Q9DCP9 168 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Ubr5Q80TP3 2792 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Dscaml1Q4VA61 2053 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Myo9aQ8C170 2542 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 CycsP62897 105 aaKnown RBP6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Gm10447Q3UQ92 135 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 MycbQ6P8Z1 170 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Ube2d2bQ6ZWY6 147 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 PtprbB2RU80 1998 aa6.62□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Ighv1-58A0A075B5W9 117 aa6.61□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Ube2dnl2A2AFH2 155 aa6.61□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Tmem95P0DJF3 176 aa6.61□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Zfp970Q08BU3 522 aa6.61□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Gm16503Q8C6M9 103 aa6.61□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Gm4894Q8CA09 118 aa6.61□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Gm29644A0A087WPG2 191 aa6.61□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Gm20219A0A1B0GRQ3 87 aa6.61□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Prss2P07146 246 aa6.61□□□□□ -1.35
Upf3b-201ENSMUST00000076265 P18533 117 aa6.61□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Smdt1Q9DB10 107 aa6.61□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Myo9bQ9QY06 2114 aa6.61□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Gm7849D3YX03 116 aa6.6□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Gm20795J3QP49 232 aa6.6□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Prss34Q80UR4 318 aa6.6□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Pcnx2Q5DU28 2122 aa6.6□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Ighv1-80A0A075B5Y3 117 aa6.6□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Gm20939L7N243 523 aa6.6□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Olfr198Q7TS40 306 aa6.6□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Hdhd3Q9CYW4 251 aa6.6□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Arhgap21Q6DFV3 1944 aa6.6□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Tln1P26039 2541 aaKnown RBP6.6□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Col5a1O88207 1838 aa6.59□□□□□ -1.35
Upf3b-201ENSMUST00000076265 1810062G17RikG3X8Y2 129 aa6.59□□□□□ -1.35
Upf3b-201ENSMUST00000076265 P18529 117 aa6.59□□□□□ -1.35
Upf3b-201ENSMUST00000076265 4930432M17RikQ3V0W9 174 aa6.59□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Olfr1270Q8VGP3 304 aa6.59□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Q9D8Q6 235 aa6.59□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Shank1D3YZU1 2167 aa6.59□□□□□ -1.35
Upf3b-201ENSMUST00000076265 Lama5Q61001 3718 aa6.59□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm21854A0A087WNM4 232 aa6.59□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Trav14n-2A0A0G2JDF5 121 aa6.59□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm5751A2AHC8 147 aa6.59□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Smim13E9Q942 88 aa6.59□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Pmis2Q497Q9 96 aa6.59□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Q4KKZ1 196 aa6.59□□□□□ -1.36
Upf3b-201ENSMUST00000076265 NppcQ61839 126 aa6.59□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Cysrt1Q9D1E4 142 aa6.59□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Zfyve26Q5DU37 2529 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm8251F6VUT6 1994 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Greb1Q3UHK3 1954 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm21776J3QPJ5 361 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 MymxQ2Q5T5 84 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm10334Q792Y8 246 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Gm5771Q792Y9 245 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Chchd10Q7TNL9 138 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Cpsf4Q8BQZ5 211 aaKnown RBP6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Prss1Q9Z1R9 246 aa6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 Phf3B2RQG2 2025 aaKnown RBP6.58□□□□□ -1.36
Upf3b-201ENSMUST00000076265 DspE9Q557 2883 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms