RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 Gnb1lQ9EQ15 326 aa13.27□□□□□ -0.28
Ddx28-201ENSMUST00000058579 ApomQ9Z1R3 190 aa13.27□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Hcfc1Q61191 2045 aaKnown RBP13.27□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Ube2e1P52482 193 aa13.27□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Odf3l1Q810P2 275 aa13.27□□□□□ -0.29
Ddx28-201ENSMUST00000058579 OtorQ9JIE3 128 aa13.27□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Nbl1Q61477 178 aa13.26□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Trav16d-dv11A0A075B617 117 aa13.25□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Tmem238lA0A1B0GS74 79 aa13.25□□□□□ -0.29
Ddx28-201ENSMUST00000058579 1700056E22RikF7CNM6 234 aa13.25□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Gng4P50153 75 aa13.25□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Olfr498Q8VEW2 330 aa13.25□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Snx22Q8C084 192 aa13.25□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Cspg4Q8VHY0 2327 aa13.25□□□□□ -0.29
Ddx28-201ENSMUST00000058579 TgfaP48030 159 aa13.24□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Cnn3Q9DAW9 330 aaKnown RBP13.24□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Wfdc15bQ9JHY4 80 aa13.24□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Tmem8bB1AWJ5 472 aa13.24□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Ang2Q64438 145 aa13.24□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Tmem219Q9D123 240 aa13.23□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Gm26938S4R185 226 aa13.23□□□□□ -0.29
Ddx28-201ENSMUST00000058579 P06330 118 aa13.23□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Prrc2aQ7TSC1 2158 aaKnown RBP13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Sptbn1Q62261 2363 aaKnown RBP13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Thy1P01831 162 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Defa-rs7P50715 91 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Gm94Q3V2D2 93 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Gpx7Q99LJ6 186 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Shisa9Q9CZN4 424 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Dusp14Q9JLY7 198 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Dopey2Q3UHQ6 2295 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Ighv3-4A0A0A6YXF1 117 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Ighv1-74A0A0G2JGK2 117 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 P01801 115 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Gpx1P11352 201 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Tcl1b4P56844 120 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Gm12888Q3UW77 119 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Olfr311Q5NC59 308 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Pxt1Q8K459 51 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 TctaQ8VEA7 122 aa13.22□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Gm7489Q3UT34 171 aa13.21□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Olfr322Q5NCC8 327 aa13.21□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Olfr317Q5NCD6 327 aa13.21□□□□□ -0.29
Ddx28-201ENSMUST00000058579 MturnQ8CGA4 131 aa13.21□□□□□ -0.29
Ddx28-201ENSMUST00000058579 RhohQ9D3G9 191 aa13.21□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Cxcl14Q9WUQ5 99 aa13.21□□□□□ -0.29
Ddx28-201ENSMUST00000058579 Med13lQ6JPI3 2207 aa13.21□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Tmem11Q8BK08 190 aa13.2□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Spock3Q8BKV0 436 aa13.2□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Socs3O35718 225 aa13.2□□□□□ -0.3
Ddx28-201ENSMUST00000058579 TdhQ8K3F7 373 aa13.2□□□□□ -0.3
Ddx28-201ENSMUST00000058579 NbasE9Q411 2356 aa13.19□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Hif1anQ8BLR9 349 aa13.19□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Ubtd1Q91WB7 227 aa13.19□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Erg28Q9ERY9 140 aa13.19□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Ighv5-8A0A075B676 92 aa13.19□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Defa13P50711 93 aa13.19□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Pip4p1Q3TWL2 284 aa13.19□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Ep300B2RWS6 2412 aa13.19□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Esp3J3QN49 87 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Mtatp8P03930 67 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Fgf6P21658 208 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Edn3P48299 214 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Defa26Q3L180 93 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Psmb11Q8BG41 302 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Tm4sf20Q9CQY8 226 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Csmd2V9GX34 3611 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Igkv4-71A0A0G2JEH0 117 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Igsf23B2RTN2 239 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Adrb3P25962 400 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Lmo4P61969 165 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Fhl1P97447 280 aaKnown RBP13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Gm5464Q3UY29 175 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Snai3Q9QY31 287 aa13.18□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Sh3bgrl2Q8BG73 107 aa13.17□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Gm17334Q8C6U3 126 aa13.17□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Ufc1Q9CR09 167 aa13.17□□□□□ -0.3
Ddx28-201ENSMUST00000058579 PerpQ9JK95 193 aa13.17□□□□□ -0.3
Ddx28-201ENSMUST00000058579 P01794 123 aa13.16□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Zfp248Q640N4 576 aa13.16□□□□□ -0.3
Ddx28-201ENSMUST00000058579 P06334 169 aa13.16□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Bsph2Q0Q236 131 aa13.16□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Htr1dQ61224 374 aa13.16□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Spcs1Q9D958 161 aa13.16□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Nit2Q9JHW2 276 aa13.16□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Ighv1-62-3P01754 117 aa13.15□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Fam208bQ5DTT3 2382 aa13.15□□□□□ -0.3
Ddx28-201ENSMUST00000058579 H2al2bA9Z055 111 aa13.15□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Khdc1cQ4KL78 166 aa13.15□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Srsf1Q6PDM2 248 aaKnown RBP13.15□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Mettl26Q9DCS2 204 aa13.15□□□□□ -0.3
Ddx28-201ENSMUST00000058579 Gm26602M0QWA4 95 aa13.14□□□□□ -0.31
Ddx28-201ENSMUST00000058579 TcraP01849 138 aa13.14□□□□□ -0.31
Ddx28-201ENSMUST00000058579 Cdx4Q07424 282 aa13.14□□□□□ -0.31
Ddx28-201ENSMUST00000058579 Mcrip2Q9CQB2 160 aaKnown RBP13.14□□□□□ -0.31
Ddx28-201ENSMUST00000058579 Svep1A2AVA0 3567 aa13.14□□□□□ -0.31
Ddx28-201ENSMUST00000058579 Odf1Q61999 247 aa13.14□□□□□ -0.31
Ddx28-201ENSMUST00000058579 Tmem97Q8VD00 176 aa13.14□□□□□ -0.31
Ddx28-201ENSMUST00000058579 SonQ9QX47 2444 aaKnown RBP13.13□□□□□ -0.31
Ddx28-201ENSMUST00000058579 Bak1O08734 209 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms