RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Faap20Q3UN58 186 aa6.69□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Ndufa12Q7TMF3 145 aaKnown RBP6.69□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Adamts7Q68SA9 1657 aa6.69□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Baz2bA2AUY4 2123 aa6.69□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Gm17472A0A075B683 117 aa6.69□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Mrps21P58059 87 aa6.69□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Cox14Q8BH51 57 aa6.69□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Cfap44E9Q5M6 1843 aa6.69□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Ighv7-4A0A0A6YXL5 121 aa6.69□□□□□ -1.34
Clcn3-202ENSMUST00000056508 CrygnQ8VHL5 183 aa6.69□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Fam229aB2KGE5 128 aa6.68□□□□□ -1.34
Clcn3-202ENSMUST00000056508 B230104I21RikQ3USW4 141 aa6.68□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Egr2P08152 470 aa6.68□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Klk14Q8CGR5 250 aa6.68□□□□□ -1.34
Clcn3-202ENSMUST00000056508 ClcP97400 68 aa6.68□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Defb22Q8BVC1 179 aa6.68□□□□□ -1.34
Clcn3-202ENSMUST00000056508 RtbdnQ8QZY4 247 aa6.68□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Them7Q9DCP4 223 aa6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Csrp1P97315 193 aaKnown RBP6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Wfdc2Q9DAU7 174 aa6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Fgf22Q9ESS2 162 aa6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Myh15E9Q264 1925 aa6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Igkv1-133A0A0B4J1H8 120 aa6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Igkv6-13A0A0G2JGY3 119 aa6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Immp1lQ9CQU8 166 aa6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Igkv8-16A0A0G2JDG9 121 aa6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Gm43218A0A0G2JGT0 114 aa6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Acyp1P56376 99 aa6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Ift172Q6VH22 1749 aa6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Gm10135F6TEE5 83 aa6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Ccl22O88430 92 aa6.67□□□□□ -1.34
Clcn3-202ENSMUST00000056508 3110082J24RikF6Z6Z2 108 aa6.66□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Gm9936Q8C864 160 aa6.66□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Myh13B1AR69 1938 aa6.66□□□□□ -1.34
Clcn3-202ENSMUST00000056508 EtdQ80SW5 59 aa6.66□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Q9D131 166 aa6.66□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Ighv3-3A0A0A6YWL2 116 aa6.66□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Fam19a3Q7TPG6 132 aa6.66□□□□□ -1.34
Clcn3-202ENSMUST00000056508 CtrlQ9ER05 264 aa6.66□□□□□ -1.34
Clcn3-202ENSMUST00000056508 EpopQ7TNS8 369 aa6.65□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Col3a1P08121 1464 aa6.65□□□□□ -1.34
Clcn3-202ENSMUST00000056508 P84751 237 aa6.65□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Tns2Q8CGB6 1400 aa6.65□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Igkv4-58A0A0G2JGI6 119 aa6.65□□□□□ -1.34
Clcn3-202ENSMUST00000056508 P18530 117 aa6.65□□□□□ -1.34
Clcn3-202ENSMUST00000056508 Q9DAS2 200 aa6.65□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Plac1Q9JI83 173 aa6.65□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Ly6g6dQ9Z1Q3 135 aa6.65□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Abca14E9Q8F8 1683 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Col16a1Q8BLX7 1580 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 BC025920Q3US60 128 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Q8BGJ3 129 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 AfdnQ9QZQ1 1820 aaKnown RBP6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 NktrP30415 1453 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Spink14B9EJP9 96 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Wisp3D3Z5L9 354 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Gm20481G3UXK4 153 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Crip2Q9DCT8 208 aaKnown RBP6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 PplQ9R269 1755 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Ndufaf8A2AMZ4 74 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Gm20696H3BJN7 74 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Gm10912Q3UXH0 145 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Cdc42se1Q8BHL7 80 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Rimbp3Q3V0F0 1606 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 4930546C10RikE9Q4Y3 121 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Gm10300Q8C8P7 189 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 GaptQ8CB93 157 aa6.64□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Depp1Q8K2F3 205 aa6.63□□□□□ -1.35
Clcn3-202ENSMUST00000056508 7420426K07RikQ3UX66 186 aa6.63□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Zc3h13E9Q784 1729 aaKnown RBP6.63□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Nav1Q8CH77 1875 aa6.63□□□□□ -1.35
Clcn3-202ENSMUST00000056508 B9d2Q3UK10 175 aa6.63□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Pla2g1bQ9Z0Y2 146 aa6.63□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Gm35549A0A0N4SUS7 141 aa6.62□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Phxr4P15974 95 aa6.62□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Gm10188Q3V432 135 aa6.62□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Defb37Q7TMD2 62 aa6.62□□□□□ -1.35
Clcn3-202ENSMUST00000056508 1700042G07RikB1AUF7 90 aa6.62□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Ly6eQ64253 130 aa6.62□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Odf3Q920N1 254 aa6.62□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Gm26620Q9CY65 116 aa6.62□□□□□ -1.35
Clcn3-202ENSMUST00000056508 ShprhQ7TPQ3 1674 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Pfn3Q9DAD6 137 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 MNCb-2875Q9DCB3 74 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Supt4h1bQ9Z199 117 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Col1a1P11087 1453 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Trav9-2A0A075B647 113 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Trav9n-2A0A0G2JDP3 113 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 P01680 129 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Znf580Q9DB38 172 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Cacna1cQ01815 2139 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Gm17732E9Q5I2 61 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Ly6hQ9WUC3 139 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 P06320 134 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Defb21Q8C5Z4 100 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Igkv4-80A0A075B5L7 116 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Dkk4Q8VEJ3 221 aa6.61□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Ankrd12G5E893 2041 aa6.6□□□□□ -1.35
Clcn3-202ENSMUST00000056508 VirmaA2AIV2 1811 aaKnown RBP6.6□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Igkv16-104A0A0B4J1I1 116 aa6.6□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms