RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Olfr904Q7TRC9 310 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Mapk1ip1lQ8BH93 242 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Rs1Q9Z1L4 224 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Trav6d-7A0A075B6B0 112 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Tmem8bB1AWJ5 472 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Lyzl1Q9CPX3 148 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Trav4-4-dv10A0A075B651 110 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm28778A0A087WSK7 233 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Nxph4G3X9N5 304 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm26602M0QWA4 95 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 P0C913 63 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Q4KKZ1 196 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Olfr1380Q7TQT5 311 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Fam241bQ9D882 120 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gnb1lQ9EQ15 326 aa8.58□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm29666A0A087WQ99 126 aa8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Nsun4C4P6S0 806 aaKnown RBP8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm12888Q3UW77 119 aa8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Zmat4Q8BZ94 229 aa8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm10118Q8C8J5 116 aa8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Olfr211Q8VGH2 309 aa8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Srsf9Q9D0B0 222 aaKnown RBP8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Lyg1Q9D7Q0 197 aa8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 AcanQ61282 2132 aaKnown RBP8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm45785A0A1B0GT05 94 aa8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Zfp983E9PUT0 460 aa8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Avpi1Q9D7H4 142 aa8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Bex1Q9R224 128 aa8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Ighv8-8A0A0A6YXQ0 119 aa8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Ifitm2Q99J93 144 aa8.57□□□□□ -1.04
Msh3-201ENSMUST00000022220 Trav7-1A0A0G2JEV5 112 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm12845A0A0N4SUM5 588 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 CrxO54751 299 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 Ighv3-6P18531 116 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 Trav7-2Q5R1I3 112 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 Mob4Q6PEB6 225 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 A730015C16RikQ8C992 119 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 Fam240aJ3QNP9 97 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gpx1P11352 201 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 PdpnQ62011 172 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 Ang2Q64438 145 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gpx7Q99LJ6 186 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 Ndufc2Q9CQ54 120 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 Tomm6Q9CQN3 74 aa8.56□□□□□ -1.04
Msh3-201ENSMUST00000022220 Celsr1O35161 3034 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 Ighv1-39A0A075B5V5 117 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 Olfr1199Q8VF94 310 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 Olfr235E9Q9Z6 312 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 Ube2e1P52482 193 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 Ripply2Q2WG76 128 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 3110018I06RikQ9CXS0 120 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm20481G3UXK4 153 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 TcraP01849 138 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm6040Q4QY32 63 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 CrygcQ61597 174 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 9130230L23RikQ8CC80 163 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 Olfr975Q8VG91 310 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 Oxld1Q9CR10 201 aa8.55□□□□□ -1.04
Msh3-201ENSMUST00000022220 P01724 129 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 P01727 129 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 P04942 107 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 Hist1h1tQ07133 208 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 Tmem136Q3TYE7 245 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm17359A0A0G2JEB7 487 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 PolP10400 120 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm10604Q3V0X7 143 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 Tcf24V9GWT9 166 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm6812B1AXU1 112 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 1700020N15RikL7MTX3 112 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm28044L7N1X0 119 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 Kiaa1549Q68FD9 1940 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 Dchs1E9PVD3 3291 aa8.54□□□□□ -1.04
Msh3-201ENSMUST00000022220 Vamp8O70404 101 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 Khdc1cQ4KL78 166 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm9573F7C950 1606 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 Trav14d-1A0A075B6B1 121 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 Igkv14-130A0A0G2JF45 117 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 Tmem238lA0A1B0GS74 79 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm20517G3UVU6 152 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 P01630 113 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 Olfr322Q5NCC8 327 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 Trav14n-2A0A0G2JDF5 121 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 Spsb3Q571F5 354 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 Trav2Q5R1I9 109 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm5105Q8C6Y9 112 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 Gm15294V9GXA7 121 aa8.53□□□□□ -1.04
Msh3-201ENSMUST00000022220 Trav6-4A0A075B6B4 115 aa8.52□□□□□ -1.04
Msh3-201ENSMUST00000022220 BlcapP62951 87 aa8.52□□□□□ -1.04
Msh3-201ENSMUST00000022220 Prima1Q810F0 153 aa8.52□□□□□ -1.04
Msh3-201ENSMUST00000022220 Them7Q9DCP4 223 aa8.52□□□□□ -1.04
Msh3-201ENSMUST00000022220 CtrlQ9ER05 264 aa8.52□□□□□ -1.04
Msh3-201ENSMUST00000022220 ApomQ9Z1R3 190 aa8.52□□□□□ -1.04
Msh3-201ENSMUST00000022220 Wdfy3Q6VNB8 3508 aa8.52□□□□□ -1.05
Msh3-201ENSMUST00000022220 Ighv1-58A0A075B5W9 117 aa8.52□□□□□ -1.05
Msh3-201ENSMUST00000022220 Ang4Q3TMQ6 144 aa8.52□□□□□ -1.05
Msh3-201ENSMUST00000022220 Oosp2Q4FZG8 168 aa8.52□□□□□ -1.05
Msh3-201ENSMUST00000022220 Mrpl53Q9D1H8 118 aaKnown RBP8.52□□□□□ -1.05
Msh3-201ENSMUST00000022220 P01726 129 aa8.52□□□□□ -1.05
Msh3-201ENSMUST00000022220 Pip4p1Q3TWL2 284 aa8.52□□□□□ -1.05
Msh3-201ENSMUST00000022220 Ovol1Q9WTJ2 267 aa8.52□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms