RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 HRES1P13985 223 aa4.8□□□□□ -1.64
PHGDH-228ENST00000641847 CYP4F30PQ9H0H9 118 aa4.8□□□□□ -1.64
PHGDH-228ENST00000641847 COX7CP15954 63 aa4.79□□□□□ -1.64
PHGDH-228ENST00000641847 C20orf197Q8N268 126 aa4.78□□□□□ -1.64
PHGDH-228ENST00000641847 SNURFQ9Y675 71 aa4.77□□□□□ -1.65
PHGDH-228ENST00000641847 KLKP1Q107X0 134 aa4.75□□□□□ -1.65
PHGDH-228ENST00000641847 MPLKIPQ8TAP9 179 aa4.75□□□□□ -1.65
PHGDH-228ENST00000641847 RBM12B-AS1Q9P1G2 102 aa4.75□□□□□ -1.65
PHGDH-228ENST00000641847 FAM236DA0A1B0GTK5 79 aa4.73□□□□□ -1.65
PHGDH-228ENST00000641847 FAM236CP0DP71 79 aa4.73□□□□□ -1.65
PHGDH-228ENST00000641847 C4orf26Q17RF5 130 aa4.73□□□□□ -1.65
PHGDH-228ENST00000641847 KRTAP19-1Q8IUB9 90 aa4.72□□□□□ -1.65
PHGDH-228ENST00000641847 CCDC179H3BU77 68 aa4.71□□□□□ -1.66
PHGDH-228ENST00000641847 CYSTM1Q9H1C7 97 aa4.68□□□□□ -1.66
PHGDH-228ENST00000641847 NDUFC1O43677 76 aa4.67□□□□□ -1.66
PHGDH-228ENST00000641847 KRTAP3-1Q9BYR8 98 aa4.66□□□□□ -1.66
PHGDH-228ENST00000641847 KRTAP9-8Q9BYQ0 159 aa4.65□□□□□ -1.67
PHGDH-228ENST00000641847 NEBP20929 6669 aa4.64□□□□□ -1.67
PHGDH-228ENST00000641847 H7BZZ5 65 aa4.64□□□□□ -1.67
PHGDH-228ENST00000641847 H1FX-AS1Q4G0G2 97 aa4.64□□□□□ -1.67
PHGDH-228ENST00000641847 A8MUN3 132 aa4.63□□□□□ -1.67
PHGDH-228ENST00000641847 SPANXA2-OT1Q8N9U9 137 aa4.63□□□□□ -1.67
PHGDH-228ENST00000641847 DMAC1Q96GE9 116 aa4.63□□□□□ -1.67
PHGDH-228ENST00000641847 KRTAP6-3Q3LI67 103 aa4.61□□□□□ -1.67
PHGDH-228ENST00000641847 S4R3F8 94 aa4.59□□□□□ -1.67
PHGDH-228ENST00000641847 ACYP2P14621 99 aa4.56□□□□□ -1.68
PHGDH-228ENST00000641847 KRTAP10-10P60014 251 aa4.56□□□□□ -1.68
PHGDH-228ENST00000641847 TMEM258P61165 79 aa4.55□□□□□ -1.68
PHGDH-228ENST00000641847 LCA10Q71F78 164 aa4.55□□□□□ -1.68
PHGDH-228ENST00000641847 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
PHGDH-228ENST00000641847 MT2AP02795 61 aa4.54□□□□□ -1.68
PHGDH-228ENST00000641847 ATP5EP56381 51 aaPredicted RBP4.54□□□□□ -1.68
PHGDH-228ENST00000641847 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
PHGDH-228ENST00000641847 KRTAP9-3Q9BYQ3 159 aa4.52□□□□□ -1.69
PHGDH-228ENST00000641847 CHKB-CPT1BH3BT56 60 aa4.51□□□□□ -1.69
PHGDH-228ENST00000641847 MT1FP04733 61 aa4.5□□□□□ -1.69
PHGDH-228ENST00000641847 COA5Q86WW8 74 aa4.5□□□□□ -1.69
PHGDH-228ENST00000641847 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
PHGDH-228ENST00000641847 CSAG1Q6PB30 78 aa4.48□□□□□ -1.69
PHGDH-228ENST00000641847 SPTSSBQ8NFR3 76 aa4.45□□□□□ -1.7
PHGDH-228ENST00000641847 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
PHGDH-228ENST00000641847 SEC61GP60059 68 aa4.41□□□□□ -1.7
PHGDH-228ENST00000641847 SERP1Q9Y6X1 66 aa4.4□□□□□ -1.71
PHGDH-228ENST00000641847 H0YAA0 97 aa4.36□□□□□ -1.71
PHGDH-228ENST00000641847 ADM2Q7Z4H4 148 aa4.36□□□□□ -1.71
PHGDH-228ENST00000641847 KMT2DO14686 5537 aa4.33□□□□□ -1.72
PHGDH-228ENST00000641847 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
PHGDH-228ENST00000641847 P0C880 135 aa4.29□□□□□ -1.72
PHGDH-228ENST00000641847 V9GYY9 64 aa4.29□□□□□ -1.72
PHGDH-228ENST00000641847 RPS28P62857 69 aaKnown RBP4.28□□□□□ -1.72
PHGDH-228ENST00000641847 SMIM26A0A096LP01 95 aa4.26□□□□□ -1.73
PHGDH-228ENST00000641847 A0A1B0GU69 56 aa4.26□□□□□ -1.73
PHGDH-228ENST00000641847 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
PHGDH-228ENST00000641847 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
PHGDH-228ENST00000641847 LINC01558Q9Y6Z2 57 aa4.26□□□□□ -1.73
PHGDH-228ENST00000641847 CRIPTQ9P021 101 aa4.24□□□□□ -1.73
PHGDH-228ENST00000641847 A6NN06 94 aa4.23□□□□□ -1.73
PHGDH-228ENST00000641847 PRR15LQ9BU68 103 aa4.23□□□□□ -1.73
PHGDH-228ENST00000641847 Q1T7F1 81 aa4.21□□□□□ -1.74
PHGDH-228ENST00000641847 R4GN34 69 aa4.21□□□□□ -1.74
PHGDH-228ENST00000641847 M0QZ58 72 aa4.2□□□□□ -1.74
PHGDH-228ENST00000641847 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
PHGDH-228ENST00000641847 KRTAP5-9P26371 169 aa4.19□□□□□ -1.74
PHGDH-228ENST00000641847 SPRR2GQ9BYE4 73 aa4.19□□□□□ -1.74
PHGDH-228ENST00000641847 A0A1B0GU33 70 aa4.18□□□□□ -1.74
PHGDH-228ENST00000641847 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
PHGDH-228ENST00000641847 PSPHP1O15172 72 aa4.16□□□□□ -1.74
PHGDH-228ENST00000641847 KRTAP13-4Q3LI77 160 aa4.15□□□□□ -1.75
PHGDH-228ENST00000641847 LINC01554Q52M75 96 aa4.13□□□□□ -1.75
PHGDH-228ENST00000641847 Q5VV11 94 aa4.12□□□□□ -1.75
PHGDH-228ENST00000641847 SPATA8Q6RVD6 105 aa4.12□□□□□ -1.75
PHGDH-228ENST00000641847 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
PHGDH-228ENST00000641847 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
PHGDH-228ENST00000641847 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
PHGDH-228ENST00000641847 UQCR11O14957 56 aa4.08□□□□□ -1.76
PHGDH-228ENST00000641847 A0A0D9SG42 100 aa4.07□□□□□ -1.76
PHGDH-228ENST00000641847 MT1BP07438 61 aa4.07□□□□□ -1.76
PHGDH-228ENST00000641847 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
PHGDH-228ENST00000641847 SPRR2EP22531 72 aa4.06□□□□□ -1.76
PHGDH-228ENST00000641847 SPRR2BP35325 72 aa4.06□□□□□ -1.76
PHGDH-228ENST00000641847 SPRR2AP35326 72 aa4.06□□□□□ -1.76
PHGDH-228ENST00000641847 A8MU10 97 aa4.05□□□□□ -1.76
PHGDH-228ENST00000641847 A6NED7 52 aa4.04□□□□□ -1.76
PHGDH-228ENST00000641847 KRTAP10-5P60370 271 aa4.04□□□□□ -1.76
PHGDH-228ENST00000641847 MIR22HGQ0VDD5 57 aa4.03□□□□□ -1.76
PHGDH-228ENST00000641847 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
PHGDH-228ENST00000641847 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
PHGDH-228ENST00000641847 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
PHGDH-228ENST00000641847 PMAIP1Q13794 54 aa3.98□□□□□ -1.77
PHGDH-228ENST00000641847 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
PHGDH-228ENST00000641847 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
PHGDH-228ENST00000641847 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
PHGDH-228ENST00000641847 SPRR2DP22532 72 aa3.94□□□□□ -1.78
PHGDH-228ENST00000641847 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
PHGDH-228ENST00000641847 CAMK2N1Q7Z7J9 78 aa3.93□□□□□ -1.78
PHGDH-228ENST00000641847 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
PHGDH-228ENST00000641847 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
PHGDH-228ENST00000641847 MT1XP80297 61 aa3.9□□□□□ -1.79
PHGDH-228ENST00000641847 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
PHGDH-228ENST00000641847 K7ERS5 55 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms