RNA–Protein interactions for RNA: ENST00000640431.1

PAX6-271, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-271ENST00000640431 LPAP08519 4548 aa8.32□□□□□ -1.08
PAX6-271ENST00000640431 C9orf92A6NGG3 77 aa8.3□□□□□ -1.08
PAX6-271ENST00000640431 SEC61GP60059 68 aa8.3□□□□□ -1.08
PAX6-271ENST00000640431 A8MUU9 505 aa8.27□□□□□ -1.09
PAX6-271ENST00000640431 SPATA8Q6RVD6 105 aa8.27□□□□□ -1.09
PAX6-271ENST00000640431 C20orf166-AS1Q96NR2 134 aa8.27□□□□□ -1.09
PAX6-271ENST00000640431 LRP2P98164 4655 aa8.27□□□□□ -1.09
PAX6-271ENST00000640431 UQCR11O14957 56 aa8.24□□□□□ -1.09
PAX6-271ENST00000640431 MIR22HGQ0VDD5 57 aa8.22□□□□□ -1.09
PAX6-271ENST00000640431 UBR4Q5T4S7 5183 aa8.18□□□□□ -1.1
PAX6-271ENST00000640431 KRTAP3-1Q9BYR8 98 aa8.17□□□□□ -1.1
PAX6-271ENST00000640431 RBM12B-AS1Q9P1G2 102 aa8.17□□□□□ -1.1
PAX6-271ENST00000640431 ADM2Q7Z4H4 148 aa8.05□□□□□ -1.12
PAX6-271ENST00000640431 PRAC1Q96KF2 57 aa8.05□□□□□ -1.12
PAX6-271ENST00000640431 H0YAA0 97 aa8□□□□□ -1.13
PAX6-271ENST00000640431 COX6B2Q6YFQ2 88 aa8□□□□□ -1.13
PAX6-271ENST00000640431 RNF213Q63HN8 5207 aa7.99□□□□□ -1.13
PAX6-271ENST00000640431 A0A1B0GU33 70 aa7.95□□□□□ -1.14
PAX6-271ENST00000640431 MUC2Q02817 5179 aa7.93□□□□□ -1.14
PAX6-271ENST00000640431 H1FX-AS1Q4G0G2 97 aa7.93□□□□□ -1.14
PAX6-271ENST00000640431 RPL37P61927 97 aaKnown RBP7.89□□□□□ -1.15
PAX6-271ENST00000640431 TPRXLQ17RH7 258 aa7.89□□□□□ -1.15
PAX6-271ENST00000640431 MUC17Q685J3 4493 aa7.88□□□□□ -1.15
PAX6-271ENST00000640431 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
PAX6-271ENST00000640431 XP32Q5T750 250 aa7.86□□□□□ -1.15
PAX6-271ENST00000640431 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
PAX6-271ENST00000640431 CSAG1Q6PB30 78 aa7.81□□□□□ -1.16
PAX6-271ENST00000640431 KRTAP10-6P60371 365 aaPredicted RBP7.75□□□□□ -1.17
PAX6-271ENST00000640431 LINC01554Q52M75 96 aa7.75□□□□□ -1.17
PAX6-271ENST00000640431 S4R3F8 94 aa7.73□□□□□ -1.17
PAX6-271ENST00000640431 KRTAP4-1Q9BYQ7 146 aa7.7□□□□□ -1.18
PAX6-271ENST00000640431 KRTAP3-2Q9BYR7 98 aa7.69□□□□□ -1.18
PAX6-271ENST00000640431 KRTAP13-4Q3LI77 160 aa7.67□□□□□ -1.18
PAX6-271ENST00000640431 K7ERS5 55 aa7.66□□□□□ -1.18
PAX6-271ENST00000640431 FAT4Q6V0I7 4981 aa7.64□□□□□ -1.19
PAX6-271ENST00000640431 SEC61BP60468 96 aaKnown RBP7.62□□□□□ -1.19
PAX6-271ENST00000640431 KRTAP25-1Q3LHN0 102 aa7.61□□□□□ -1.19
PAX6-271ENST00000640431 P0C880 135 aa7.59□□□□□ -1.19
PAX6-271ENST00000640431 A0A0D9SG42 100 aa7.58□□□□□ -1.2
PAX6-271ENST00000640431 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
PAX6-271ENST00000640431 ROMO1P60602 79 aa7.51□□□□□ -1.21
PAX6-271ENST00000640431 KRTAP12-2P59991 146 aa7.41□□□□□ -1.22
PAX6-271ENST00000640431 KRTAP19-2Q3LHN2 52 aa7.4□□□□□ -1.22
PAX6-271ENST00000640431 LCE2CQ5TA81 110 aa7.37□□□□□ -1.23
PAX6-271ENST00000640431 KRTAP12-1P59990 96 aa7.36□□□□□ -1.23
PAX6-271ENST00000640431 FLGP20930 4061 aaPredicted RBP7.34□□□□□ -1.23
PAX6-271ENST00000640431 M0QZ58 72 aa7.32□□□□□ -1.24
PAX6-271ENST00000640431 SPINT4Q6UDR6 99 aa7.32□□□□□ -1.24
PAX6-271ENST00000640431 C10orf95Q9H7T3 257 aa7.27□□□□□ -1.25
PAX6-271ENST00000640431 LCE2AQ5TA79 106 aaPredicted RBP7.26□□□□□ -1.25
PAX6-271ENST00000640431 MT1HP80294 61 aa7.23□□□□□ -1.25
PAX6-271ENST00000640431 R4GN34 69 aa7.15□□□□□ -1.26
PAX6-271ENST00000640431 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
PAX6-271ENST00000640431 M0R2T5 61 aa7.11□□□□□ -1.27
PAX6-271ENST00000640431 H3BS24 57 aa6.99□□□□□ -1.29
PAX6-271ENST00000640431 KRTAP15-1Q3LI76 137 aa6.94□□□□□ -1.3
PAX6-271ENST00000640431 KRTAP9-8Q9BYQ0 159 aa6.89□□□□□ -1.31
PAX6-271ENST00000640431 MT2AP02795 61 aa6.84□□□□□ -1.31
PAX6-271ENST00000640431 MT1FP04733 61 aa6.82□□□□□ -1.32
PAX6-271ENST00000640431 KRTAP9-2Q9BYQ4 174 aa6.79□□□□□ -1.32
PAX6-271ENST00000640431 FSIP2Q5CZC0 6907 aa6.79□□□□□ -1.32
PAX6-271ENST00000640431 CAMK2N1Q7Z7J9 78 aa6.77□□□□□ -1.32
PAX6-271ENST00000640431 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
PAX6-271ENST00000640431 NDUFAF8A1L188 74 aa6.72□□□□□ -1.33
PAX6-271ENST00000640431 USH2AO75445 5202 aa6.69□□□□□ -1.34
PAX6-271ENST00000640431 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
PAX6-271ENST00000640431 PP632Q6XCG6 107 aa6.65□□□□□ -1.35
PAX6-271ENST00000640431 PLAC4Q8WY50 150 aa6.64□□□□□ -1.35
PAX6-271ENST00000640431 LCE2BO14633 110 aa6.6□□□□□ -1.35
PAX6-271ENST00000640431 SSPOA2VEC9 5147 aa6.6□□□□□ -1.35
PAX6-271ENST00000640431 TNP1P09430 55 aa6.53□□□□□ -1.36
PAX6-271ENST00000640431 SPRR2GQ9BYE4 73 aa6.52□□□□□ -1.37
PAX6-271ENST00000640431 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
PAX6-271ENST00000640431 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
PAX6-271ENST00000640431 CRCT1Q9UGL9 99 aa6.45□□□□□ -1.38
PAX6-271ENST00000640431 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
PAX6-271ENST00000640431 FCGBPQ9Y6R7 5405 aaPredicted RBP6.33□□□□□ -1.4
PAX6-271ENST00000640431 MT1BP07438 61 aa6.33□□□□□ -1.4
PAX6-271ENST00000640431 KRTAP19-8Q3LI54 63 aa6.29□□□□□ -1.4
PAX6-271ENST00000640431 LUZP6Q538Z0 58 aa6.29□□□□□ -1.4
PAX6-271ENST00000640431 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
PAX6-271ENST00000640431 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
PAX6-271ENST00000640431 KRTAP19-6Q3LI70 58 aa6.21□□□□□ -1.42
PAX6-271ENST00000640431 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
PAX6-271ENST00000640431 MT1XP80297 61 aa6.12□□□□□ -1.43
PAX6-271ENST00000640431 MACF1Q9UPN3 7388 aaKnown RBP6.11□□□□□ -1.43
PAX6-271ENST00000640431 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
PAX6-271ENST00000640431 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.45
PAX6-271ENST00000640431 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
PAX6-271ENST00000640431 KMT2DO14686 5537 aa5.98□□□□□ -1.45
PAX6-271ENST00000640431 KRTAP10-12P60413 245 aa5.98□□□□□ -1.45
PAX6-271ENST00000640431 KRTAP10-7P60409 375 aaPredicted RBP5.96□□□□□ -1.46
PAX6-271ENST00000640431 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
PAX6-271ENST00000640431 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
PAX6-271ENST00000640431 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
PAX6-271ENST00000640431 KRTAP9-7A8MTY7 169 aa5.82□□□□□ -1.48
PAX6-271ENST00000640431 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
PAX6-271ENST00000640431 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
PAX6-271ENST00000640431 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
PAX6-271ENST00000640431 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms