RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	LCE2A	Q5TA79	106 aa	Predicted RBP	5.51	□□□□□ -1.53
NECAP1-223	ENST00000640091	CHKB-CPT1B	H3BT56	60 aa		5.51	□□□□□ -1.53
NECAP1-223	ENST00000640091	SPINK7	P58062	85 aa		5.5	□□□□□ -1.53
NECAP1-223	ENST00000640091	HMCN2	Q8NDA2	5059 aa		5.49	□□□□□ -1.53
NECAP1-223	ENST00000640091	C7orf65	Q6ZTY9	151 aa		5.49	□□□□□ -1.53
NECAP1-223	ENST00000640091	HRES1	P13985	223 aa		5.47	□□□□□ -1.53
NECAP1-223	ENST00000640091	PRR15L	Q9BU68	103 aa		5.47	□□□□□ -1.53
NECAP1-223	ENST00000640091	CDC42SE1	Q9NRR8	79 aa		5.47	□□□□□ -1.53
NECAP1-223	ENST00000640091	LOC100996750	A0A140TA64	210 aa		5.47	□□□□□ -1.53
NECAP1-223	ENST00000640091	KRTAP4-6	Q9BYQ5	205 aa		5.47	□□□□□ -1.53
NECAP1-223	ENST00000640091	LCE2C	Q5TA81	110 aa		5.45	□□□□□ -1.54
NECAP1-223	ENST00000640091	SPTSSB	Q8NFR3	76 aa		5.44	□□□□□ -1.54
NECAP1-223	ENST00000640091	SEC61B	P60468	96 aa	Known RBP	5.43	□□□□□ -1.54
NECAP1-223	ENST00000640091		A6NED7	52 aa		5.42	□□□□□ -1.54
NECAP1-223	ENST00000640091	COA5	Q86WW8	74 aa		5.41	□□□□□ -1.54
NECAP1-223	ENST00000640091	LINC01558	Q9Y6Z2	57 aa		5.41	□□□□□ -1.54
NECAP1-223	ENST00000640091	MUC2	Q02817	5179 aa		5.41	□□□□□ -1.54
NECAP1-223	ENST00000640091	KRTAP4-1	Q9BYQ7	146 aa		5.38	□□□□□ -1.55
NECAP1-223	ENST00000640091	KRTAP3-1	Q9BYR8	98 aa		5.36	□□□□□ -1.55
NECAP1-223	ENST00000640091	LOR	P23490	312 aa	Predicted RBP	5.35	□□□□□ -1.55
NECAP1-223	ENST00000640091	DMAC1	Q96GE9	116 aa		5.35	□□□□□ -1.55
NECAP1-223	ENST00000640091	MUC17	Q685J3	4493 aa		5.34	□□□□□ -1.55
NECAP1-223	ENST00000640091	UBR4	Q5T4S7	5183 aa		5.33	□□□□□ -1.56
NECAP1-223	ENST00000640091	COX6B2	Q6YFQ2	88 aa		5.33	□□□□□ -1.56
NECAP1-223	ENST00000640091	ACYP2	P14621	99 aa		5.32	□□□□□ -1.56
NECAP1-223	ENST00000640091	RNF213	Q63HN8	5207 aa		5.26	□□□□□ -1.57
NECAP1-223	ENST00000640091	LINC01554	Q52M75	96 aa		5.23	□□□□□ -1.57
NECAP1-223	ENST00000640091	H1FX-AS1	Q4G0G2	97 aa		5.21	□□□□□ -1.57
NECAP1-223	ENST00000640091	PRAC1	Q96KF2	57 aa		5.21	□□□□□ -1.58
NECAP1-223	ENST00000640091	KRTAP19-2	Q3LHN2	52 aa		5.2	□□□□□ -1.58
NECAP1-223	ENST00000640091	ADM2	Q7Z4H4	148 aa		5.18	□□□□□ -1.58
NECAP1-223	ENST00000640091		S4R3F8	94 aa		5.17	□□□□□ -1.58
NECAP1-223	ENST00000640091	FAT4	Q6V0I7	4981 aa		5.16	□□□□□ -1.58
NECAP1-223	ENST00000640091	SPATA8	Q6RVD6	105 aa		5.16	□□□□□ -1.58
NECAP1-223	ENST00000640091		H3BS24	57 aa		5.15	□□□□□ -1.58
NECAP1-223	ENST00000640091		A0A1B0GU69	56 aa		5.07	□□□□□ -1.6
NECAP1-223	ENST00000640091	CSAG1	Q6PB30	78 aa		5.06	□□□□□ -1.6
NECAP1-223	ENST00000640091	UQCR11	O14957	56 aa		5.05	□□□□□ -1.6
NECAP1-223	ENST00000640091	MIR22HG	Q0VDD5	57 aa		5.05	□□□□□ -1.6
NECAP1-223	ENST00000640091	FLG	P20930	4061 aa	Predicted RBP	5.05	□□□□□ -1.6
NECAP1-223	ENST00000640091	MT1H	P80294	61 aa		5	□□□□□ -1.61
NECAP1-223	ENST00000640091		M0R2T5	61 aa		4.98	□□□□□ -1.61
NECAP1-223	ENST00000640091	KRTAP10-6	P60371	365 aa	Predicted RBP	4.94	□□□□□ -1.62
NECAP1-223	ENST00000640091		P0C880	135 aa		4.94	□□□□□ -1.62
NECAP1-223	ENST00000640091	ROMO1	P60602	79 aa		4.9	□□□□□ -1.62
NECAP1-223	ENST00000640091		H0YAA0	97 aa		4.9	□□□□□ -1.63
NECAP1-223	ENST00000640091	KRTAP25-1	Q3LHN0	102 aa		4.9	□□□□□ -1.63
NECAP1-223	ENST00000640091		A0A1B0GU33	70 aa		4.88	□□□□□ -1.63
NECAP1-223	ENST00000640091	KRTAP4-8	Q9BYQ9	185 aa		4.86	□□□□□ -1.63
NECAP1-223	ENST00000640091	KRTAP13-4	Q3LI77	160 aa		4.83	□□□□□ -1.64
NECAP1-223	ENST00000640091	KRTAP9-8	Q9BYQ0	159 aa		4.82	□□□□□ -1.64
NECAP1-223	ENST00000640091	MT2A	P02795	61 aa		4.79	□□□□□ -1.64
NECAP1-223	ENST00000640091		R4GN34	69 aa		4.78	□□□□□ -1.64
NECAP1-223	ENST00000640091		M0QZ58	72 aa		4.78	□□□□□ -1.64
NECAP1-223	ENST00000640091	MT1F	P04733	61 aa		4.77	□□□□□ -1.65
NECAP1-223	ENST00000640091	KRTAP10-10	P60014	251 aa		4.77	□□□□□ -1.65
NECAP1-223	ENST00000640091		A0A0D9SG42	100 aa		4.75	□□□□□ -1.65
NECAP1-223	ENST00000640091	KRTAP9-2	Q9BYQ4	174 aa		4.73	□□□□□ -1.65
NECAP1-223	ENST00000640091	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.73	□□□□□ -1.65
NECAP1-223	ENST00000640091	KRTAP9-6	A0A140TA67	174 aa		4.72	□□□□□ -1.65
NECAP1-223	ENST00000640091	CRIPT	Q9P021	101 aa		4.7	□□□□□ -1.66
NECAP1-223	ENST00000640091	KRTAP19-1	Q8IUB9	90 aa		4.67	□□□□□ -1.66
NECAP1-223	ENST00000640091	LCE3B	Q5TA77	95 aa		4.64	□□□□□ -1.67
NECAP1-223	ENST00000640091	SPRR2G	Q9BYE4	73 aa		4.64	□□□□□ -1.67
NECAP1-223	ENST00000640091	KRTAP9-3	Q9BYQ3	159 aa		4.64	□□□□□ -1.67
NECAP1-223	ENST00000640091	SPINT4	Q6UDR6	99 aa		4.63	□□□□□ -1.67
NECAP1-223	ENST00000640091		K7ERS5	55 aa		4.63	□□□□□ -1.67
NECAP1-223	ENST00000640091	KRTAP12-2	P59991	146 aa		4.63	□□□□□ -1.67
NECAP1-223	ENST00000640091	KRTAP12-1	P59990	96 aa		4.61	□□□□□ -1.67
NECAP1-223	ENST00000640091	KRTAP15-1	Q3LI76	137 aa		4.57	□□□□□ -1.68
NECAP1-223	ENST00000640091	KRTAP4-8	A0A0G2JLE6	195 aa		4.55	□□□□□ -1.68
NECAP1-223	ENST00000640091	KRTAP19-8	Q3LI54	63 aa		4.52	□□□□□ -1.69
NECAP1-223	ENST00000640091	USH2A	O75445	5202 aa		4.51	□□□□□ -1.69
NECAP1-223	ENST00000640091	NDUFAF8	A1L188	74 aa		4.51	□□□□□ -1.69
NECAP1-223	ENST00000640091	PLAC4	Q8WY50	150 aa		4.5	□□□□□ -1.69
NECAP1-223	ENST00000640091	MT1B	P07438	61 aa		4.49	□□□□□ -1.69
NECAP1-223	ENST00000640091	KRTAP9-9	Q9BYP9	154 aa		4.49	□□□□□ -1.69
NECAP1-223	ENST00000640091	KRTAP9-4	Q9BYQ2	154 aa		4.49	□□□□□ -1.69
NECAP1-223	ENST00000640091	CAMK2N1	Q7Z7J9	78 aa		4.48	□□□□□ -1.69
NECAP1-223	ENST00000640091	FSIP2	Q5CZC0	6907 aa		4.46	□□□□□ -1.7
NECAP1-223	ENST00000640091	KRTAP4-12	Q9BQ66	201 aa		4.46	□□□□□ -1.7
NECAP1-223	ENST00000640091	C10orf95	Q9H7T3	257 aa		4.44	□□□□□ -1.7
NECAP1-223	ENST00000640091	KRTAP4-7	Q9BYR0	210 aa		4.43	□□□□□ -1.7
NECAP1-223	ENST00000640091		A0A0A0MQY5	61 aa		4.34	□□□□□ -1.71
NECAP1-223	ENST00000640091	MT1X	P80297	61 aa		4.34	□□□□□ -1.71
NECAP1-223	ENST00000640091	KRTAP10-5	P60370	271 aa		4.34	□□□□□ -1.71
NECAP1-223	ENST00000640091	LCE1D	Q5T752	114 aa		4.33	□□□□□ -1.72
NECAP1-223	ENST00000640091	SSPO	A2VEC9	5147 aa		4.32	□□□□□ -1.72
NECAP1-223	ENST00000640091	KRTAP19-4	Q3LI73	84 aa		4.31	□□□□□ -1.72
NECAP1-223	ENST00000640091	PRO2289	Q9P1D8	64 aa		4.27	□□□□□ -1.73
NECAP1-223	ENST00000640091	KRTAP4-9	Q9BYQ8	210 aa		4.25	□□□□□ -1.73
NECAP1-223	ENST00000640091	TNP1	P09430	55 aa		4.23	□□□□□ -1.73
NECAP1-223	ENST00000640091	KRTAP19-6	Q3LI70	58 aa		4.22	□□□□□ -1.73
NECAP1-223	ENST00000640091	LUZP6	Q538Z0	58 aa		4.21	□□□□□ -1.74
NECAP1-223	ENST00000640091	KRTAP4-2	Q9BYR5	136 aa		4.21	□□□□□ -1.74
NECAP1-223	ENST00000640091	KRTAP10-7	P60409	375 aa	Predicted RBP	4.19	□□□□□ -1.74
NECAP1-223	ENST00000640091	KMT2D	O14686	5537 aa		4.14	□□□□□ -1.75
NECAP1-223	ENST00000640091	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.13	□□□□□ -1.75
NECAP1-223	ENST00000640091	CRCT1	Q9UGL9	99 aa		4.1	□□□□□ -1.75
NECAP1-223	ENST00000640091	KRTAP10-12	P60413	245 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms