RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 ACYP2P14621 99 aa10.17□□□□□ -0.78
SCARB2-219ENST00000639738 KRTAP3-3Q9BYR6 98 aa10.15□□□□□ -0.78
SCARB2-219ENST00000639738 KRTAP9-6A0A140TA67 174 aa10.13□□□□□ -0.79
SCARB2-219ENST00000639738 ATP5EP56381 51 aaPredicted RBP10.13□□□□□ -0.79
SCARB2-219ENST00000639738 LCA10Q71F78 164 aa10.12□□□□□ -0.79
SCARB2-219ENST00000639738 S4R3F8 94 aa10.12□□□□□ -0.79
SCARB2-219ENST00000639738 COA5Q86WW8 74 aa10.05□□□□□ -0.8
SCARB2-219ENST00000639738 CSAG1Q6PB30 78 aa9.93□□□□□ -0.82
SCARB2-219ENST00000639738 CHKB-CPT1BH3BT56 60 aa9.92□□□□□ -0.82
SCARB2-219ENST00000639738 M0R2T5 61 aa9.91□□□□□ -0.82
SCARB2-219ENST00000639738 SERP1Q9Y6X1 66 aa9.9□□□□□ -0.82
SCARB2-219ENST00000639738 KRTAP10-6P60371 365 aaPredicted RBP9.87□□□□□ -0.83
SCARB2-219ENST00000639738 LORP23490 312 aaPredicted RBP9.84□□□□□ -0.83
SCARB2-219ENST00000639738 CRCT1Q9UGL9 99 aa9.83□□□□□ -0.84
SCARB2-219ENST00000639738 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
SCARB2-219ENST00000639738 KRTAP9-8Q9BYQ0 159 aa9.81□□□□□ -0.84
SCARB2-219ENST00000639738 FSIP2Q5CZC0 6907 aa9.79□□□□□ -0.84
SCARB2-219ENST00000639738 RPS28P62857 69 aaKnown RBP9.77□□□□□ -0.85
SCARB2-219ENST00000639738 H0YAA0 97 aa9.74□□□□□ -0.85
SCARB2-219ENST00000639738 MT2AP02795 61 aa9.72□□□□□ -0.85
SCARB2-219ENST00000639738 KRTAP3-2Q9BYR7 98 aa9.72□□□□□ -0.85
SCARB2-219ENST00000639738 MT1FP04733 61 aa9.66□□□□□ -0.86
SCARB2-219ENST00000639738 ADM2Q7Z4H4 148 aa9.64□□□□□ -0.87
SCARB2-219ENST00000639738 P0C880 135 aa9.6□□□□□ -0.87
SCARB2-219ENST00000639738 SMIM26A0A096LP01 95 aa9.58□□□□□ -0.88
SCARB2-219ENST00000639738 LINC01558Q9Y6Z2 57 aa9.58□□□□□ -0.88
SCARB2-219ENST00000639738 KRTAP10-10P60014 251 aa9.54□□□□□ -0.88
SCARB2-219ENST00000639738 Q1T7F1 81 aa9.51□□□□□ -0.89
SCARB2-219ENST00000639738 KRTAP9-3Q9BYQ3 159 aa9.47□□□□□ -0.89
SCARB2-219ENST00000639738 A0A1B0GU69 56 aa9.46□□□□□ -0.89
SCARB2-219ENST00000639738 SEC61GP60059 68 aa9.45□□□□□ -0.9
SCARB2-219ENST00000639738 V9GYY9 64 aa9.42□□□□□ -0.9
SCARB2-219ENST00000639738 CRIPTQ9P021 101 aa9.4□□□□□ -0.91
SCARB2-219ENST00000639738 KRTAP19-1Q8IUB9 90 aa9.39□□□□□ -0.91
SCARB2-219ENST00000639738 PRR15LQ9BU68 103 aa9.36□□□□□ -0.91
SCARB2-219ENST00000639738 SPRR2GQ9BYE4 73 aa9.36□□□□□ -0.91
SCARB2-219ENST00000639738 KRTAP13-4Q3LI77 160 aa9.32□□□□□ -0.92
SCARB2-219ENST00000639738 A0A1B0GU33 70 aa9.31□□□□□ -0.92
SCARB2-219ENST00000639738 PSPHP1O15172 72 aa9.31□□□□□ -0.92
SCARB2-219ENST00000639738 Q5VV11 94 aa9.29□□□□□ -0.92
SCARB2-219ENST00000639738 R4GN34 69 aa9.28□□□□□ -0.92
SCARB2-219ENST00000639738 M0QZ58 72 aa9.27□□□□□ -0.93
SCARB2-219ENST00000639738 USH2AO75445 5202 aa9.27□□□□□ -0.93
SCARB2-219ENST00000639738 LCE2BO14633 110 aa9.26□□□□□ -0.93
SCARB2-219ENST00000639738 SSPOA2VEC9 5147 aa9.21□□□□□ -0.93
SCARB2-219ENST00000639738 SPATA8Q6RVD6 105 aa9.2□□□□□ -0.94
SCARB2-219ENST00000639738 KRTAP19-8Q3LI54 63 aa9.19□□□□□ -0.94
SCARB2-219ENST00000639738 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.17□□□□□ -0.94
SCARB2-219ENST00000639738 UQCR11O14957 56 aa9.12□□□□□ -0.95
SCARB2-219ENST00000639738 KRTAP9-7A8MTY7 169 aa9.1□□□□□ -0.95
SCARB2-219ENST00000639738 MT1BP07438 61 aa9.1□□□□□ -0.95
SCARB2-219ENST00000639738 LINC01554Q52M75 96 aa9.06□□□□□ -0.96
SCARB2-219ENST00000639738 FCGBPQ9Y6R7 5405 aaPredicted RBP9.04□□□□□ -0.96
SCARB2-219ENST00000639738 A8MU10 97 aa9.04□□□□□ -0.96
SCARB2-219ENST00000639738 A6NN06 94 aa9□□□□□ -0.97
SCARB2-219ENST00000639738 MIR22HGQ0VDD5 57 aa9□□□□□ -0.97
SCARB2-219ENST00000639738 A0A0D9SG42 100 aa9□□□□□ -0.97
SCARB2-219ENST00000639738 A6NED7 52 aa8.99□□□□□ -0.97
SCARB2-219ENST00000639738 KRTAP12-1P59990 96 aa8.93□□□□□ -0.98
SCARB2-219ENST00000639738 KRTAP12-2P59991 146 aa8.88□□□□□ -0.99
SCARB2-219ENST00000639738 KRTAP19-6Q3LI70 58 aa8.85□□□□□ -0.99
SCARB2-219ENST00000639738 PLAC4Q8WY50 150 aa8.85□□□□□ -0.99
SCARB2-219ENST00000639738 CDC42SE1Q9NRR8 79 aa8.84□□□□□ -0.99
SCARB2-219ENST00000639738 SPINT4Q6UDR6 99 aa8.8□□□□□ -1
SCARB2-219ENST00000639738 MT1XP80297 61 aa8.71□□□□□ -1.01
SCARB2-219ENST00000639738 KRTAP10-5P60370 271 aa8.7□□□□□ -1.02
SCARB2-219ENST00000639738 MACF1Q9UPN3 7388 aaKnown RBP8.66□□□□□ -1.02
SCARB2-219ENST00000639738 BRK1Q8WUW1 75 aa8.64□□□□□ -1.03
SCARB2-219ENST00000639738 CAMK2N1Q7Z7J9 78 aa8.62□□□□□ -1.03
SCARB2-219ENST00000639738 SYNE2Q8WXH0 6885 aaKnown RBP8.58□□□□□ -1.04
SCARB2-219ENST00000639738 K7ERS5 55 aa8.56□□□□□ -1.04
SCARB2-219ENST00000639738 PRO2289Q9P1D8 64 aa8.52□□□□□ -1.05
SCARB2-219ENST00000639738 KRTAP6-3Q3LI67 103 aa8.5□□□□□ -1.05
SCARB2-219ENST00000639738 C10orf95Q9H7T3 257 aa8.49□□□□□ -1.05
SCARB2-219ENST00000639738 KRTAP10-7P60409 375 aaPredicted RBP8.33□□□□□ -1.08
SCARB2-219ENST00000639738 PRO0628Q9UI54 55 aa8.32□□□□□ -1.08
SCARB2-219ENST00000639738 KRTAP10-12P60413 245 aa8.28□□□□□ -1.08
SCARB2-219ENST00000639738 ROMO1P60602 79 aa8.25□□□□□ -1.09
SCARB2-219ENST00000639738 TNP1P09430 55 aa8.19□□□□□ -1.1
SCARB2-219ENST00000639738 PMAIP1Q13794 54 aa8.17□□□□□ -1.1
SCARB2-219ENST00000639738 KRTAP25-1Q3LHN0 102 aa8.13□□□□□ -1.11
SCARB2-219ENST00000639738 MUC12Q9UKN1 5478 aa8.13□□□□□ -1.11
SCARB2-219ENST00000639738 KMT2DO14686 5537 aa8.11□□□□□ -1.11
SCARB2-219ENST00000639738 KRTAP4-8A0A0G2JLE6 195 aa8.09□□□□□ -1.11
SCARB2-219ENST00000639738 KRTAP4-8Q9BYQ9 185 aa8.09□□□□□ -1.11
SCARB2-219ENST00000639738 KRTAP5-9P26371 169 aa8.07□□□□□ -1.12
SCARB2-219ENST00000639738 NEBP20929 6669 aa8.04□□□□□ -1.12
SCARB2-219ENST00000639738 LCE3AQ5TA76 89 aa7.97□□□□□ -1.13
SCARB2-219ENST00000639738 KRTAP20-1Q3LI63 56 aa7.96□□□□□ -1.14
SCARB2-219ENST00000639738 KRTAP23-1A1A580 65 aa7.91□□□□□ -1.14
SCARB2-219ENST00000639738 MDN1Q9NU22 5596 aa7.9□□□□□ -1.14
SCARB2-219ENST00000639738 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
SCARB2-219ENST00000639738 KRTAP19-7Q3SYF9 63 aa7.8□□□□□ -1.16
SCARB2-219ENST00000639738 SPRR2FQ96RM1 72 aa7.79□□□□□ -1.16
SCARB2-219ENST00000639738 KRTAP19-5Q3LI72 72 aa7.76□□□□□ -1.17
SCARB2-219ENST00000639738 PP632Q6XCG6 107 aa7.76□□□□□ -1.17
SCARB2-219ENST00000639738 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
SCARB2-219ENST00000639738 PRAC1Q96KF2 57 aa7.73□□□□□ -1.17
SCARB2-219ENST00000639738 SPRR2EP22531 72 aa7.71□□□□□ -1.18
SCARB2-219ENST00000639738 SPRR2BP35325 72 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms